RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 NSD1Q96L73 2696 aaPredicted RBP6.2□□□□□ -1.42
ERCC8-202ENST00000381118 H3BUA1 57 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 RPLP1P05386 114 aaKnown RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 PSMB8P28062 276 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 FCGR2BP31994 310 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 ATP5G3P48201 142 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 PLP1P60201 277 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 UBE2L3P68036 154 aaKnown RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 MEF2BQ02080 365 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 SCGB2A2Q13296 93 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 PQLC2Q6ZP29 291 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 CYB561D1Q8N8Q1 229 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 OR4F5Q8NH21 305 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 FAM167A-AS1Q96KT0 104 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 OR4F4Q96R69 305 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 RNF2Q99496 336 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 SLC35B3Q9H1N7 401 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 MANBALQ9NQG1 85 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 VAX2Q9UIW0 290 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 WI2-2373I1.2A0A1W2PRP0 233 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 C11orf94C9JXX5 98 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 H3BTX0 84 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 IGHG4P01861 327 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 SRP19P09132 144 aaKnown RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 ARL3P36405 182 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 CD81P60033 236 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 SLC35B1P78383 322 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 HIST2H2BDQ6DRA6 164 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 TEX38Q6PEX7 206 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 Q6ZSV7 163 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 OR4X2Q8NGF9 303 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 ZNF418Q8TF45 676 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 BLNKQ8WV28 456 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 USMG5Q96IX5 58 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 PAXXQ9BUH6 204 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 OR51M1Q9H341 326 aa6.19□□□□□ -1.42
ERCC8-202ENST00000381118 GAR1Q9NY12 217 aaKnown RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 MRPL27Q9P0M9 148 aaKnown RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 YTHDF2Q9Y5A9 579 aaKnown RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 SETD2Q9BYW2 2564 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-202ENST00000381118 F8P00451 2351 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 ZNF207O43670 478 aaKnown RBP6.18□□□□□ -1.42
ERCC8-202ENST00000381118 OR2C1O95371 312 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 CRYBA1P05813 215 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 GUCA2BQ16661 112 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 TOMM20LQ6UXN7 152 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 ZNF600Q6ZNG1 722 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 C20orf24Q9BUV8 137 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 SEC11CQ9BY50 192 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 SERTAD4Q9NUC0 356 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 ZNF580Q9UK33 172 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 FN1P02751 2386 aaKnown RBP6.18□□□□□ -1.42
ERCC8-202ENST00000381118 IGHV3OR16-13A0A075B7E8 117 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 IGHV3-74A0A0B4J1X5 117 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 A0A0G2JLM5 398 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 SCO1O75880 301 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 SRSF2Q01130 221 aaKnown RBP6.18□□□□□ -1.42
ERCC8-202ENST00000381118 KLHDC1Q8N7A1 406 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 ZNF414Q96IQ9 312 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 TMEM167BQ9NRX6 74 aa6.18□□□□□ -1.42
ERCC8-202ENST00000381118 IGHV3-49A0A0A0MS15 119 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 IGHV3-66A0A0C4DH42 116 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 ZNF98A6NK75 572 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 FAM74A7A6NL05 159 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 H3BRN7 92 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 BMPR1BO00238 502 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 BRI3O95415 125 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 HILS1P60008 231 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 RELQ04864 619 aaPredicted RBP6.17□□□□□ -1.42
ERCC8-202ENST00000381118 ZNF674Q2M3X9 581 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 KHDC1LQ5JSQ8 128 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 SOHLH1Q5JUK2 328 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 Q8N2B8 174 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 RPUSD4Q96CM3 377 aaKnown RBP6.17□□□□□ -1.42
ERCC8-202ENST00000381118 FXYD5Q96DB9 178 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 SMDT1Q9H4I9 107 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 ZFAND3Q9H8U3 227 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 RABAC1Q9UI14 185 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.17□□□□□ -1.42
ERCC8-202ENST00000381118 CYSRT1A8MQ03 144 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 RNASE1P07998 156 aaKnown RBP6.17□□□□□ -1.42
ERCC8-202ENST00000381118 GP9P14770 177 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 RPL15P61313 204 aaKnown RBP6.17□□□□□ -1.42
ERCC8-202ENST00000381118 PMS2P11Q13670 270 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 ZNF343Q6P1L6 599 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 UNQ9165/PRO28630Q6UXU0 137 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 SHANK2-AS3Q9BTD1 123 aa6.17□□□□□ -1.42
ERCC8-202ENST00000381118 ZNF320A2RRD8 509 aa6.16□□□□□ -1.42
ERCC8-202ENST00000381118 CLDN34H7C241 214 aa6.16□□□□□ -1.42
ERCC8-202ENST00000381118 RANP62826 216 aaKnown RBP6.16□□□□□ -1.42
ERCC8-202ENST00000381118 C10orf91Q5T1B1 145 aa6.16□□□□□ -1.42
ERCC8-202ENST00000381118 FAM90A2PQ658T7 463 aa6.16□□□□□ -1.42
ERCC8-202ENST00000381118 ATRAIDQ6UW56 229 aa6.16□□□□□ -1.42
ERCC8-202ENST00000381118 CCDC28AQ8IWP9 274 aa6.16□□□□□ -1.42
ERCC8-202ENST00000381118 C11orf44Q8N8P7 122 aa6.16□□□□□ -1.42
ERCC8-202ENST00000381118 PEF1Q9UBV8 284 aaKnown RBP6.16□□□□□ -1.42
ERCC8-202ENST00000381118 SCO2A0A1W2PP80 73 aa6.15□□□□□ -1.42
ERCC8-202ENST00000381118 GGTLC3B5MD39 225 aa6.15□□□□□ -1.42
ERCC8-202ENST00000381118 APOHP02749 345 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms