RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 REG4Q9BYZ8 158 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 TNFSF13O75888 250 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 GZMBP10144 247 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 DSCR9P59020 149 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 MBD3L4A6NDZ8 208 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-202ENST00000380518 MBD3L3A6NE82 208 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-202ENST00000380518 MBD3L5A6NJ08 208 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-202ENST00000380518 LILRA1O75019 489 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 RPL15P61313 204 aaKnown RBP13.15□□□□□ -0.3
COL2A1-202ENST00000380518 KIR3DL3Q8N743 410 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 MBD3L2Q8NHZ7 208 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-202ENST00000380518 TRGV4A0A0C4DH28 118 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 SEC11AP67812 179 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 LY6DQ14210 128 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 C5orf64Q2M2E5 130 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 BMPERQ8N8U9 685 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 MPDZO75970 2070 aa13.15□□□□□ -0.3
COL2A1-202ENST00000380518 MALP21145 153 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 HSD52Q0P140 79 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 MYO7BQ6PIF6 2116 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 LHFPL4Q7Z7J7 247 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 NTF4P34130 210 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 SFTA2Q6UW10 78 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 FNDC4Q9H6D8 234 aaPredicted RBP13.14□□□□□ -0.31
COL2A1-202ENST00000380518 HOXA3O43365 443 aaPredicted RBP13.14□□□□□ -0.31
COL2A1-202ENST00000380518 OR5A1Q8NGJ0 315 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 ASCL4Q6XD76 172 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 C5orf24Q7Z6I8 188 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 BEND2Q8NDZ0 799 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 GAFA1Q96PS6 74 aa13.14□□□□□ -0.31
COL2A1-202ENST00000380518 LAGE3Q14657 143 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 C9orf139Q6ZV77 190 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 ABCA4P78363 2273 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 TRAV8-2A0A0B4J237 113 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 ZNF138P52744 262 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 OR2K2Q8NGT1 345 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 RFNGQ9Y644 331 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 TRAV2A0A0B4J234 112 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 IGHG3P01860 377 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 LYL1P12980 280 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 SRD5A1P18405 259 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 ERVK11-1P61568 191 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 PAX2Q02962 417 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 GLRX5Q86SX6 157 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 OR9G4Q8NGQ1 327 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 IGKV1D-17A0A075B6S4 117 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 C15orf62A8K5M9 175 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 MEGF9Q9H1U4 602 aa13.13□□□□□ -0.31
COL2A1-202ENST00000380518 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
COL2A1-202ENST00000380518 D6R8Y8 96 aa13.12□□□□□ -0.31
COL2A1-202ENST00000380518 M0R1W7 72 aa13.12□□□□□ -0.31
COL2A1-202ENST00000380518 KLRD1Q13241 179 aa13.12□□□□□ -0.31
COL2A1-202ENST00000380518 LYZL1Q6UWQ5 148 aa13.12□□□□□ -0.31
COL2A1-202ENST00000380518 SIGLEC9Q9Y336 463 aa13.12□□□□□ -0.31
COL2A1-202ENST00000380518 CD300EQ496F6 205 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-202ENST00000380518 TMEM219Q86XT9 240 aa13.12□□□□□ -0.31
COL2A1-202ENST00000380518 KLF17Q5JT82 389 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-202ENST00000380518 NOTCH3Q9UM47 2321 aa13.12□□□□□ -0.31
COL2A1-202ENST00000380518 SLC25A20O43772 301 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 NCR2O95944 276 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 PI4KAP42356 2102 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 LYPD1Q8N2G4 141 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 ZNF479Q96JC4 524 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 ZNF581Q9P0T4 197 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 DIDO1Q9BTC0 2240 aaKnown RBP13.11□□□□□ -0.31
COL2A1-202ENST00000380518 LRRK1Q38SD2 2015 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 A0A0G2JNJ9 132 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 BUB1B-PAK6H3BSN5 160 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 TMEM95Q3KNT9 176 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 C20orf204Q6ZNR8 217 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 Q9UFV3 132 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 TMEM8BA6NDV4 472 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 LINC00469Q8N7U9 141 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 CHCHD5Q9BSY4 110 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 PGPEP1Q9NXJ5 209 aa13.11□□□□□ -0.31
COL2A1-202ENST00000380518 A0A0G2JRQ6 117 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 FNDC10F2Z333 226 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 CMC4P56277 68 aaPredicted RBP13.1□□□□□ -0.31
COL2A1-202ENST00000380518 ACTL10Q5JWF8 245 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 WFDC12Q8WWY7 111 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 TRBV7-1A0A0A6YYK4 115 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 GBF1Q92538 1859 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 Q6ZS92 163 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 KIAA2026Q5HYC2 2103 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 B4DSR2 109 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 PRB4P10163 310 aaPredicted RBP13.1□□□□□ -0.31
COL2A1-202ENST00000380518 FHL1Q13642 323 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 C1orf194Q5T5A4 169 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 Q6ZRM9 215 aa13.1□□□□□ -0.31
COL2A1-202ENST00000380518 SRRM4A7MD48 611 aaKnown RBP13.09□□□□□ -0.31
COL2A1-202ENST00000380518 IGHV4-39P01824 125 aa13.09□□□□□ -0.31
COL2A1-202ENST00000380518 NUP35Q8NFH5 326 aa13.09□□□□□ -0.31
COL2A1-202ENST00000380518 RNASE2P10153 161 aaKnown RBP13.09□□□□□ -0.31
COL2A1-202ENST00000380518 CFPP27918 469 aa13.09□□□□□ -0.31
COL2A1-202ENST00000380518 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-202ENST00000380518 C11orf44Q8N8P7 122 aa13.09□□□□□ -0.31
COL2A1-202ENST00000380518 TRAV12-3A0A0B4J271 114 aa13.09□□□□□ -0.31
COL2A1-202ENST00000380518 H3BUX3 64 aa13.09□□□□□ -0.31
COL2A1-202ENST00000380518 TMEM256Q8N2U0 113 aa13.09□□□□□ -0.31
COL2A1-202ENST00000380518 LINC00477Q96M19 166 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms