RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 VWC2LB2RUY7 222 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 PSG1P11464 419 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 PLGLAQ15195 96 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 FBXL15Q9H469 300 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 OTORQ9NRC9 128 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 PCNX1Q96RV3 2341 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 FAM181BA6NEQ2 426 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 COX7A1P24310 79 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 RBPJQ06330 500 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 LINC00322Q6ZN03 302 aaPredicted RBP13.01□□□□□ -0.33
VPS16-203ENST00000380469 TXN2Q99757 166 aa13.01□□□□□ -0.33
VPS16-203ENST00000380469 C19orf71A6NCJ1 209 aa13□□□□□ -0.33
VPS16-203ENST00000380469 IGLC2P0DOY2 106 aa13□□□□□ -0.33
VPS16-203ENST00000380469 IGLC3P0DOY3 106 aa13□□□□□ -0.33
VPS16-203ENST00000380469 FOSL1P15407 271 aa13□□□□□ -0.33
VPS16-203ENST00000380469 SRSF12Q8WXF0 261 aaKnown RBP13□□□□□ -0.33
VPS16-203ENST00000380469 PGLYRP4Q96LB8 373 aa13□□□□□ -0.33
VPS16-203ENST00000380469 RASL11BQ9BPW5 248 aa13□□□□□ -0.33
VPS16-203ENST00000380469 GFRA4Q9GZZ7 299 aa13□□□□□ -0.33
VPS16-203ENST00000380469 TMEM14CQ9P0S9 112 aa13□□□□□ -0.33
VPS16-203ENST00000380469 PPIAL4CA0A0B4J2A2 164 aa13□□□□□ -0.33
VPS16-203ENST00000380469 LYNX1G3V0Z9 82 aa13□□□□□ -0.33
VPS16-203ENST00000380469 RBP4P02753 201 aa13□□□□□ -0.33
VPS16-203ENST00000380469 IGLC1P0CG04 106 aa13□□□□□ -0.33
VPS16-203ENST00000380469 PPIAL4GP0DN37 164 aa13□□□□□ -0.33
VPS16-203ENST00000380469 LYNX1P0DP58 116 aa13□□□□□ -0.33
VPS16-203ENST00000380469 BTF3P20290 206 aaKnown RBP13□□□□□ -0.33
VPS16-203ENST00000380469 TCF15Q12870 199 aa13□□□□□ -0.33
VPS16-203ENST00000380469 COL5A1-AS1Q5SY13 56 aa13□□□□□ -0.33
VPS16-203ENST00000380469 RNF5Q99942 180 aa13□□□□□ -0.33
VPS16-203ENST00000380469 SLC25A39Q9BZJ4 359 aaPredicted RBP13□□□□□ -0.33
VPS16-203ENST00000380469 A6NNC1 897 aa12.99□□□□□ -0.33
VPS16-203ENST00000380469 Q6ZN92 141 aa12.99□□□□□ -0.33
VPS16-203ENST00000380469 RBPMS2Q6ZRY4 209 aaKnown RBP12.99□□□□□ -0.33
VPS16-203ENST00000380469 GTSF1Q8WW33 167 aa12.99□□□□□ -0.33
VPS16-203ENST00000380469 ANKRD11Q6UB99 2663 aaPredicted RBP12.99□□□□□ -0.33
VPS16-203ENST00000380469 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.99□□□□□ -0.33
VPS16-203ENST00000380469 CNIH1O95406 144 aa12.99□□□□□ -0.33
VPS16-203ENST00000380469 TMEM208Q9BTX3 173 aa12.99□□□□□ -0.33
VPS16-203ENST00000380469 LPAR2Q9HBW0 351 aa12.99□□□□□ -0.33
VPS16-203ENST00000380469 I3L2K1 104 aa12.98□□□□□ -0.33
VPS16-203ENST00000380469 HNRNPA3P51991 378 aaKnown RBP12.98□□□□□ -0.33
VPS16-203ENST00000380469 PRR30Q53SZ7 412 aaPredicted RBP12.98□□□□□ -0.33
VPS16-203ENST00000380469 LCN12Q6JVE5 192 aa12.98□□□□□ -0.33
VPS16-203ENST00000380469 ATOH7Q8N100 152 aa12.98□□□□□ -0.33
VPS16-203ENST00000380469 OR8B3Q8NGG8 313 aa12.98□□□□□ -0.33
VPS16-203ENST00000380469 OR8B2Q96RD0 313 aa12.98□□□□□ -0.33
VPS16-203ENST00000380469 MALRD1Q5VYJ5 2156 aa12.98□□□□□ -0.33
VPS16-203ENST00000380469 FAM231BA6NCW3 169 aa12.97□□□□□ -0.33
VPS16-203ENST00000380469 COL8A1P27658 744 aa12.97□□□□□ -0.33
VPS16-203ENST00000380469 EBLN2Q6P2I7 272 aa12.97□□□□□ -0.33
VPS16-203ENST00000380469 SRSF8Q9BRL6 282 aaKnown RBP12.97□□□□□ -0.33
VPS16-203ENST00000380469 DLEU1O43261 78 aa12.97□□□□□ -0.33
VPS16-203ENST00000380469 Q56UQ5 140 aa12.97□□□□□ -0.33
VPS16-203ENST00000380469 PRNTQ86SH4 94 aa12.97□□□□□ -0.33
VPS16-203ENST00000380469 Q86TA4 180 aa12.97□□□□□ -0.33
VPS16-203ENST00000380469 RNF24Q9Y225 148 aa12.97□□□□□ -0.33
VPS16-203ENST00000380469 ACACAQ13085 2346 aa12.96□□□□□ -0.33
VPS16-203ENST00000380469 KALRNO60229 2985 aa12.96□□□□□ -0.33
VPS16-203ENST00000380469 GAGE1Q13065 139 aa12.96□□□□□ -0.33
VPS16-203ENST00000380469 VKORC1Q9BQB6 163 aa12.96□□□□□ -0.33
VPS16-203ENST00000380469 TRAV9-2A0A087WT02 112 aa12.96□□□□□ -0.34
VPS16-203ENST00000380469 CHEK1O14757 476 aa12.96□□□□□ -0.34
VPS16-203ENST00000380469 GOLT1AQ6ZVE7 132 aa12.96□□□□□ -0.34
VPS16-203ENST00000380469 EXOC3-AS1Q8N2X6 119 aa12.96□□□□□ -0.34
VPS16-203ENST00000380469 MUC15Q8N387 334 aa12.96□□□□□ -0.34
VPS16-203ENST00000380469 TMEM190Q8WZ59 177 aa12.96□□□□□ -0.34
VPS16-203ENST00000380469 SCNM1Q9BWG6 230 aa12.96□□□□□ -0.34
VPS16-203ENST00000380469 ONECUT1Q9UBC0 465 aa12.96□□□□□ -0.34
VPS16-203ENST00000380469 BSNQ9UPA5 3926 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 TRAV8-1A0A0A6YYK1 113 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 C20orf202A1L168 122 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 LY6LH3BQJ8 138 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 FOXA3P55318 350 aaPredicted RBP12.95□□□□□ -0.34
VPS16-203ENST00000380469 CIARTQ8N365 385 aaPredicted RBP12.95□□□□□ -0.34
VPS16-203ENST00000380469 CHCHD1Q96BP2 118 aaKnown RBP12.95□□□□□ -0.34
VPS16-203ENST00000380469 GOLT1BQ9Y3E0 138 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 C2orf70A6NJV1 201 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 NPIPB6E9PJ23 425 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 TOX4O94842 621 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 PRR31Q5SQ13 230 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 BPIFA4PQ86YQ2 179 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 OR4F17Q8NGA8 305 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 LINC01560Q8TB33 94 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 LAMTOR2Q9Y2Q5 125 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 RIF1Q5UIP0 2472 aaKnown RBP12.95□□□□□ -0.34
VPS16-203ENST00000380469 ADGRG4Q8IZF6 3080 aa12.95□□□□□ -0.34
VPS16-203ENST00000380469 ATMQ13315 3056 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 IGKV1-17P01599 117 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 MAJINQ3KP22 176 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 TMEM70Q9BUB7 260 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 ZFHX2Q9C0A1 2572 aaPredicted RBP12.94□□□□□ -0.34
VPS16-203ENST00000380469 TRBV6-1A0A0K0K1D8 114 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 TIMM23O14925 209 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 LIPFP07098 398 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 URB1-AS1Q96HZ7 61 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 NDFIP1Q9BT67 221 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 SHANK2-AS3Q9BTD1 123 aa12.94□□□□□ -0.34
VPS16-203ENST00000380469 PIEZO2Q9H5I5 2752 aa12.93□□□□□ -0.34
VPS16-203ENST00000380469 K7EQM0 130 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms