RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 KLK9Q9UKQ9 250 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 KLF12Q9Y4X4 402 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 TRAPPC1Q9Y5R8 145 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 TRBV9A0A0B4J1U6 114 aa18.22■□□□□ 0.51
VPS16-201ENST00000380443 SAA4P35542 130 aa18.22■□□□□ 0.51
VPS16-201ENST00000380443 RANP62826 216 aaKnown RBP18.22■□□□□ 0.51
VPS16-201ENST00000380443 TMEM183AQ8IXX5 376 aa18.22■□□□□ 0.51
VPS16-201ENST00000380443 Q8N9W7 124 aa18.22■□□□□ 0.51
VPS16-201ENST00000380443 PGPA6NDG6 321 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 SLC25A5P05141 298 aaKnown RBP18.21■□□□□ 0.51
VPS16-201ENST00000380443 FCGR2BP31994 310 aaPredicted RBP18.21■□□□□ 0.51
VPS16-201ENST00000380443 SHANK2-AS3Q9BTD1 123 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 IGHV7-81A0A0B4J1V7 117 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 WI2-2373I1.2A0A1W2PRP0 233 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 GNG7O60262 68 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 OR5I1Q13606 314 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 FBLN7Q53RD9 439 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 BAGE2Q86Y30 109 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 C10orf105Q8TEF2 133 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 ATG101Q9BSB4 218 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 OTORQ9NRC9 128 aa18.21■□□□□ 0.51
VPS16-201ENST00000380443 HECTD1Q9ULT8 2610 aa18.21■□□□□ 0.5
VPS16-201ENST00000380443 IBA57Q5T440 356 aaKnown RBP18.2■□□□□ 0.5
VPS16-201ENST00000380443 HIST2H2BCQ6DN03 193 aa18.2■□□□□ 0.5
VPS16-201ENST00000380443 ZNF600Q6ZNG1 722 aa18.2■□□□□ 0.5
VPS16-201ENST00000380443 BLNKQ8WV28 456 aa18.2■□□□□ 0.5
VPS16-201ENST00000380443 IFITM10A6NMD0 228 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 VWC2LB2RUY7 222 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 H3BRN7 92 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 SLC17A3O00476 420 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 UBE2G1P62253 170 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 NDPQ00604 133 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 BPIFA4PQ86YQ2 179 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 ZNF491Q8N8L2 437 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 RNF125Q96EQ8 232 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 C21orf62Q9NYP8 219 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 MGST1P10620 155 aaKnown RBP18.19■□□□□ 0.5
VPS16-201ENST00000380443 S100A7P31151 101 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 CLEC2AQ6UVW9 174 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 LYPD1Q8N2G4 141 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 VN1R17PQ8TDU5 208 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 FMC1Q96HJ9 113 aa18.19■□□□□ 0.5
VPS16-201ENST00000380443 LRBAP50851 2863 aa18.18■□□□□ 0.5
VPS16-201ENST00000380443 XKRY2A2RUG3 117 aa18.18■□□□□ 0.5
VPS16-201ENST00000380443 FAM110DQ8TAY7 271 aaPredicted RBP18.18■□□□□ 0.5
VPS16-201ENST00000380443 Q9H3A6 140 aa18.18■□□□□ 0.5
VPS16-201ENST00000380443 CENPVL3A0A0U1RRI6 287 aa18.17■□□□□ 0.5
VPS16-201ENST00000380443 EGR2P11161 476 aaPredicted RBP18.17■□□□□ 0.5
VPS16-201ENST00000380443 OR4F17Q8NGA8 305 aa18.17■□□□□ 0.5
VPS16-201ENST00000380443 GPR61Q9BZJ8 451 aa18.17■□□□□ 0.5
VPS16-201ENST00000380443 WDR73Q6P4I2 378 aa18.16■□□□□ 0.5
VPS16-201ENST00000380443 GPR82Q96P67 336 aa18.16■□□□□ 0.5
VPS16-201ENST00000380443 SMIM27A0A1W2PRY6 76 aa18.16■□□□□ 0.5
VPS16-201ENST00000380443 KLF17Q5JT82 389 aaPredicted RBP18.16■□□□□ 0.5
VPS16-201ENST00000380443 DNLZQ5SXM8 178 aa18.16■□□□□ 0.5
VPS16-201ENST00000380443 FAM120AOSQ5T036 256 aa18.16■□□□□ 0.5
VPS16-201ENST00000380443 RNASE7Q9H1E1 156 aaKnown RBP18.16■□□□□ 0.5
VPS16-201ENST00000380443 CRYBG3Q68DQ2 2970 aa18.15■□□□□ 0.5
VPS16-201ENST00000380443 TRBV6-1A0A0K0K1D8 114 aa18.15■□□□□ 0.5
VPS16-201ENST00000380443 MT-ND6P03923 174 aa18.15■□□□□ 0.5
VPS16-201ENST00000380443 IL4P05112 153 aa18.15■□□□□ 0.5
VPS16-201ENST00000380443 DSCR9P59020 149 aa18.15■□□□□ 0.5
VPS16-201ENST00000380443 Q56UQ5 140 aa18.15■□□□□ 0.5
VPS16-201ENST00000380443 LINC00479Q96M42 142 aa18.15■□□□□ 0.5
VPS16-201ENST00000380443 GNB1LQ9BYB4 327 aa18.15■□□□□ 0.5
VPS16-201ENST00000380443 TCRAP04437 139 aa18.14■□□□□ 0.5
VPS16-201ENST00000380443 GFI1BQ5VTD9 330 aa18.14■□□□□ 0.5
VPS16-201ENST00000380443 ZNF586Q9NXT0 402 aa18.14■□□□□ 0.5
VPS16-201ENST00000380443 IGHV1-69DA0A0B4J2H0 117 aa18.14■□□□□ 0.49
VPS16-201ENST00000380443 ZNF705GA8MUZ8 300 aaPredicted RBP18.14■□□□□ 0.49
VPS16-201ENST00000380443 IGHV1-69P01742 117 aa18.14■□□□□ 0.49
VPS16-201ENST00000380443 ATP5J2P56134 94 aa18.14■□□□□ 0.49
VPS16-201ENST00000380443 LEMD1Q68G75 181 aa18.14■□□□□ 0.49
VPS16-201ENST00000380443 OR8I2Q8N0Y5 310 aa18.14■□□□□ 0.49
VPS16-201ENST00000380443 PIP4P2Q8N4L2 257 aa18.14■□□□□ 0.49
VPS16-201ENST00000380443 GRAMD2BQ96HH9 432 aa18.14■□□□□ 0.49
VPS16-201ENST00000380443 FLNBO75369 2602 aaKnown RBP18.13■□□□□ 0.49
VPS16-201ENST00000380443 GATCO43716 136 aaKnown RBP18.13■□□□□ 0.49
VPS16-201ENST00000380443 NDUFB8O95169 186 aa18.13■□□□□ 0.49
VPS16-201ENST00000380443 CMTM2Q8TAZ6 248 aa18.13■□□□□ 0.49
VPS16-201ENST00000380443 TRBV19A0A075B6N1 114 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 IGHV4-61A0A0C4DH41 118 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 F8W735 103 aaPredicted RBP18.12■□□□□ 0.49
VPS16-201ENST00000380443 GNG5P63218 68 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 PDE6HQ13956 83 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 RASL11AQ6T310 242 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 OR10D4PQ8NGN7 298 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 MLST8Q9BVC4 326 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 NIT2Q9NQR4 276 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 FBXL7Q9UJT9 491 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 IGLC2P0DOY2 106 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 PAX1P15863 534 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 MBD6Q96DN6 1003 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 HIST1H2BLQ99880 126 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 MEGF9Q9H1U4 602 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 SERTAD4Q9NUC0 356 aa18.12■□□□□ 0.49
VPS16-201ENST00000380443 DCHS2Q6V1P9 2916 aa18.11■□□□□ 0.49
VPS16-201ENST00000380443 TRAV34A0A0B4J273 112 aa18.11■□□□□ 0.49
VPS16-201ENST00000380443 IZUMO1RA6ND01 250 aa18.11■□□□□ 0.49
VPS16-201ENST00000380443 OR2J3O76001 311 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms