RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 FAM234AQ9H0X4 552 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 FZR1Q9UM11 496 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 ZNF407Q9C0G0 2248 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 PMS2P5A8MQ11 134 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 IGLV2-8P01709 118 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 APOHP02749 345 aaPredicted RBP7.6□□□□□ -1.19
PTPRA-204ENST00000380393 PIP4P2Q8N4L2 257 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 OR1L4Q8NGR5 311 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 PIGCQ92535 297 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 LYZL4Q96KX0 146 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 WDR83OSQ9Y284 106 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 LGALS9BQ3B8N2 356 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 LGALS9CQ6DKI2 356 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 DUX4L9Q6RFH8 374 aaPredicted RBP7.6□□□□□ -1.19
PTPRA-204ENST00000380393 ATP5L2Q7Z4Y8 100 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 Q8N7P7 452 aa7.6□□□□□ -1.19
PTPRA-204ENST00000380393 A0A1W2PPI3 338 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 A0A1W2PR77 199 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 H3BVH4 76 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 ZG16O60844 167 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 COL8A2P25067 703 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 KIR2DS2P43631 304 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 GFERP55789 205 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 C9orf153Q5TBE3 101 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 CHCHD5Q9BSY4 110 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 KNTC1P50748 2209 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 SDK2Q58EX2 2172 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 PCSK5Q92824 1860 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 OOSP1A8MZH6 123 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 GGTLC3B5MD39 225 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 IGLC6P0CF74 106 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 B4GALT1P15291 398 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 SPINK9Q5DT21 86 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 SFTA2Q6UW10 78 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 RBPMS2Q6ZRY4 209 aaKnown RBP7.59□□□□□ -1.19
PTPRA-204ENST00000380393 C10orf126Q8N4M7 172 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 TCF19Q9Y242 345 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 TRAV8-1A0A0A6YYK1 113 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 TNFSF11O14788 317 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 TUSC2O75896 110 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 TBC1D28Q2M2D7 210 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 CIARTQ8N365 385 aaPredicted RBP7.59□□□□□ -1.19
PTPRA-204ENST00000380393 UBALD1Q8TB05 177 aa7.59□□□□□ -1.19
PTPRA-204ENST00000380393 CEP192Q8TEP8 1941 aa7.59□□□□□ -1.2
PTPRA-204ENST00000380393 TRBV25-1A0A075B6N4 114 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 IGHV3-15A0A0B4J1V0 119 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 LOC107984156A0A0G2JMH3 177 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 DNPH1O43598 174 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 IGHMP01871 453 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 AREGP15514 252 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 ASIPP42127 132 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 ARL17AQ8IVW1 177 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 SSMEM1Q8WWF3 244 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 FAM186AA6NE01 2351 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 A0A1B0GXF2 115 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 A8MWV9 139 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 C10orf142B7Z368 130 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 PATE4P0C8F1 98 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 HERVK_113P63121 156 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 ZNF816Q0VGE8 651 aaPredicted RBP7.58□□□□□ -1.2
PTPRA-204ENST00000380393 TREML4Q6UXN2 200 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 ZNF414Q96IQ9 312 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 PLEKHA3Q9HB20 300 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 MBD3L4A6NDZ8 208 aaPredicted RBP7.58□□□□□ -1.2
PTPRA-204ENST00000380393 MBD3L3A6NE82 208 aaPredicted RBP7.58□□□□□ -1.2
PTPRA-204ENST00000380393 MBD3L5A6NJ08 208 aaPredicted RBP7.58□□□□□ -1.2
PTPRA-204ENST00000380393 M0R135 149 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 ORM2P19652 201 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 SEC61GP60059 68 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 PRSS3P2Q8NHM4 247 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 ZNF799Q96GE5 643 aa7.58□□□□□ -1.2
PTPRA-204ENST00000380393 ENSAO43768 121 aaKnown RBP7.57□□□□□ -1.2
PTPRA-204ENST00000380393 IGLV3-21P80748 117 aaPredicted RBP7.57□□□□□ -1.2
PTPRA-204ENST00000380393 SLC25A45Q8N413 288 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 ANKRD29Q8N6D5 301 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 KLK5Q9Y337 293 aaPredicted RBP7.57□□□□□ -1.2
PTPRA-204ENST00000380393 J3QLI3 93 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 NDUFA7O95182 113 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 IL4P05112 153 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 EDN2P20800 178 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 IL11RAQ14626 422 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 FGFRL1Q8N441 504 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 OR4C13Q8NGP0 309 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 ZFHX4Q86UP3 3567 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 IGKV2D-26A0A0A0MRZ7 120 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 IGHV5-51A0A0C4DH38 117 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 MZT1Q08AG7 82 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 SIGLEC15Q6ZMC9 328 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 PROCRQ9UNN8 238 aa7.57□□□□□ -1.2
PTPRA-204ENST00000380393 A0A1B0GX51 115 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 HRCT1Q6UXD1 115 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 H2BFWTQ7Z2G1 175 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 IGF2BP2-AS1Q96M15 143 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 USF3Q68DE3 2245 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 OTOGLQ3ZCN5 2332 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 IGKV1-6A0A0C4DH72 117 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 IGKV1-12A0A0C4DH73 117 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 ACTL6BO94805 426 aa7.56□□□□□ -1.2
PTPRA-204ENST00000380393 IGKV1D-12P01611 117 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms