RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 OSR1Q8TAX0 266 aaPredicted RBP6.11□□□□□ -1.43
CDKL5-202ENST00000379996 TMEM167AQ8TBQ9 72 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 MRPL20Q9BYC9 149 aaKnown RBP6.11□□□□□ -1.43
CDKL5-202ENST00000379996 OSTCQ9NRP0 149 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 MRPL36Q9P0J6 103 aaKnown RBP6.11□□□□□ -1.43
CDKL5-202ENST00000379996 IGHV1-69DA0A0B4J2H0 117 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 CENPVL3A0A0U1RRI6 287 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 A0A1W2PRE2 83 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 ISLRO14498 428 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 IGHV1-69P01742 117 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 CBLN1P23435 193 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 ARF6P62330 175 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 WIPF2Q8TF74 440 aaPredicted RBP6.11□□□□□ -1.43
CDKL5-202ENST00000379996 NEU1Q99519 415 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 HIF1ANQ9NWT6 349 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 MDFIC2A0A1B0GVS7 189 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 RAB4AP20338 218 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 OR5I1Q13606 314 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 DIAPH2-AS1Q14236 149 aa6.11□□□□□ -1.43
CDKL5-202ENST00000379996 MRPL32Q9BYC8 188 aaKnown RBP6.11□□□□□ -1.43
CDKL5-202ENST00000379996 UNC79Q9P2D8 2635 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 HTR1DP28221 377 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 MC5RP33032 325 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 CTRLP40313 264 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 GNG10P50151 68 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 CCDC144NLQ6NUI1 221 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 PDPNQ86YL7 162 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 WFDC3Q8IUB2 231 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 CACNG8Q8WXS5 425 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 CFHR4Q92496 578 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 TMEM167BQ9NRX6 74 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 DPM3Q9P2X0 92 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 ANKRD17O75179 2603 aaKnown RBP6.1□□□□□ -1.43
CDKL5-202ENST00000379996 A0A1W2PPI3 338 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 NPFFO15130 113 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 GATA2P23769 480 aaPredicted RBP6.1□□□□□ -1.43
CDKL5-202ENST00000379996 MFAP2P55001 183 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 PQLC2Q6ZP29 291 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 FAM231DQ6ZW35 169 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 MMD2Q8IY49 270 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 FXYD5Q96DB9 178 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 SNHG12Q9BXW3 62 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 PLEKHA3Q9HB20 300 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 SLC35D1Q9NTN3 355 aa6.1□□□□□ -1.43
CDKL5-202ENST00000379996 CRYBG3Q68DQ2 2970 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 VPS13CQ709C8 3753 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 GRIFINA4D1Z8 144 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 SERF1AO75920 110 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 IQCJQ1A5X6 159 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 MRPL52Q86TS9 123 aaKnown RBP6.09□□□□□ -1.43
CDKL5-202ENST00000379996 ZNF329Q86UD4 541 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 OR10X1Q8NGY0 326 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 RITA1Q96K30 269 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 C20orf144Q9BQM9 153 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 NAGKQ9UJ70 344 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 PTPN13Q12923 2485 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 CSMD2Q7Z408 3487 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 CRYBB3P26998 211 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 OR10J1P30954 320 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 RPEL1Q2QD12 228 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 TDRG1Q3Y452 100 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 KLF17Q5JT82 389 aaPredicted RBP6.09□□□□□ -1.43
CDKL5-202ENST00000379996 GDF5OSQ5U4N7 250 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 OR5T1Q8NG75 326 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 FKBP11Q9NYL4 201 aa6.09□□□□□ -1.43
CDKL5-202ENST00000379996 TECRQ9NZ01 308 aaKnown RBP6.09□□□□□ -1.43
CDKL5-202ENST00000379996 IGHV1-3A0A0C4DH29 117 aa6.09□□□□□ -1.44
CDKL5-202ENST00000379996 ERVFC1-1P60608 527 aa6.09□□□□□ -1.44
CDKL5-202ENST00000379996 PSG5Q15238 335 aa6.09□□□□□ -1.44
CDKL5-202ENST00000379996 RTL8BQ17RB0 113 aa6.09□□□□□ -1.44
CDKL5-202ENST00000379996 OR10J3Q5JRS4 329 aa6.09□□□□□ -1.44
CDKL5-202ENST00000379996 CIARTQ8N365 385 aaPredicted RBP6.09□□□□□ -1.44
CDKL5-202ENST00000379996 Q8N6K4 173 aa6.09□□□□□ -1.44
CDKL5-202ENST00000379996 OR1L6Q8NGR2 347 aa6.09□□□□□ -1.44
CDKL5-202ENST00000379996 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.44
CDKL5-202ENST00000379996 ROS1P08922 2347 aa6.09□□□□□ -1.44
CDKL5-202ENST00000379996 TNCP24821 2201 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 SPTAN1Q13813 2472 aaKnown RBP6.08□□□□□ -1.44
CDKL5-202ENST00000379996 TRAV5A0A0B4J249 113 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 IGLC7A0M8Q6 106 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 HNF1AP20823 631 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 SSTP61278 116 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 NUTF2P61970 127 aaKnown RBP6.08□□□□□ -1.44
CDKL5-202ENST00000379996 PAFAH1B2P68402 229 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 LDLRAD2Q5SZI1 272 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 C16orf54Q6UWD8 224 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 OR2T6Q8NHC8 308 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 RCHY1Q96PM5 261 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 KLF12Q9Y4X4 402 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 A0A1B0GXF2 115 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 BMPR1BO00238 502 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 REG1AP05451 166 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 RNASE1P07998 156 aaKnown RBP6.08□□□□□ -1.44
CDKL5-202ENST00000379996 C8orf88P0DMB2 117 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 TGIF2LXQ8IUE1 241 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 NPBQ8NG41 125 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 CMTM2Q8TAZ6 248 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 MLST8Q9BVC4 326 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 GNB4Q9HAV0 340 aa6.08□□□□□ -1.44
CDKL5-202ENST00000379996 TCRBV4S1A1TA0A5B7 111 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms