RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 PAQR4Q8N4S7 273 aaPredicted RBP11.62□□□□□ -0.55
TRIM13-202ENST00000378182 THAP8Q8NA92 274 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 VWCEQ96DN2 955 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 TCRAP04437 139 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 IGKCP01834 107 aa11.61□□□□□ -0.55
TRIM13-202ENST00000378182 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
TRIM13-202ENST00000378182 DOCK11Q5JSL3 2073 aa11.61□□□□□ -0.55
TRIM13-202ENST00000378182 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
TRIM13-202ENST00000378182 WISP3O95389 354 aaPredicted RBP11.61□□□□□ -0.55
TRIM13-202ENST00000378182 MORN3Q6PF18 240 aaPredicted RBP11.61□□□□□ -0.55
TRIM13-202ENST00000378182 TMEM126AQ9H061 195 aa11.61□□□□□ -0.55
TRIM13-202ENST00000378182 HELZP42694 1942 aaKnown RBP11.61□□□□□ -0.55
TRIM13-202ENST00000378182 LAGE3Q14657 143 aa11.61□□□□□ -0.55
TRIM13-202ENST00000378182 ITGB1BP1O14713 200 aa11.61□□□□□ -0.55
TRIM13-202ENST00000378182 TIMP3P35625 211 aa11.61□□□□□ -0.55
TRIM13-202ENST00000378182 ZFP36L1Q07352 338 aaKnown RBP11.61□□□□□ -0.55
TRIM13-202ENST00000378182 DMRTC2Q8IXT2 367 aaPredicted RBP11.61□□□□□ -0.55
TRIM13-202ENST00000378182 COL6A6A6NMZ7 2263 aa11.61□□□□□ -0.55
TRIM13-202ENST00000378182 TEX43Q6ZNM6 134 aa11.6□□□□□ -0.55
TRIM13-202ENST00000378182 TMEM144Q7Z5S9 345 aa11.6□□□□□ -0.55
TRIM13-202ENST00000378182 RBM38Q9H0Z9 239 aaKnown RBP11.6□□□□□ -0.55
TRIM13-202ENST00000378182 PSMG3Q9BT73 122 aaPredicted RBP11.6□□□□□ -0.55
TRIM13-202ENST00000378182 TRIOBPQ9H2D6 2365 aa11.6□□□□□ -0.55
TRIM13-202ENST00000378182 DKK1O94907 266 aa11.6□□□□□ -0.55
TRIM13-202ENST00000378182 NACAE9PAV3 2078 aa11.6□□□□□ -0.55
TRIM13-202ENST00000378182 C22orf46C9J442 243 aa11.6□□□□□ -0.55
TRIM13-202ENST00000378182 LCN12Q6JVE5 192 aa11.6□□□□□ -0.55
TRIM13-202ENST00000378182 C1QTNF4Q9BXJ3 329 aa11.6□□□□□ -0.55
TRIM13-202ENST00000378182 Q6AWC8 147 aa11.6□□□□□ -0.55
TRIM13-202ENST00000378182 DKK4Q9UBT3 224 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 DMRT1Q9Y5R6 373 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 BUB1B-PAK6H3BSN5 160 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 H3BUT2 72 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 PRB1P04280 392 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 PSG1P11464 419 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 NKAPP1Q8N9T2 125 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 MS4A6AQ9H2W1 248 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 SLC25A16P16260 332 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 C1QL4Q86Z23 238 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 NDUFS5O43920 106 aa11.59□□□□□ -0.55
TRIM13-202ENST00000378182 ORMDL2Q53FV1 153 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 CSTL1Q9H114 145 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 KLK9Q9UKQ9 250 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE12JA6NER3 117 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 LINC01619G3V211 115 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 MSMBP08118 114 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE1Q13065 139 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE4Q13068 117 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE5Q13069 117 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE13Q4V321 117 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 ZNF562Q6V9R5 426 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 ORAOV1Q8WV07 137 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 NPDC1Q9NQX5 325 aaPredicted RBP11.58□□□□□ -0.56
TRIM13-202ENST00000378182 C14orf178Q8N769 122 aaPredicted RBP11.58□□□□□ -0.56
TRIM13-202ENST00000378182 IGLV2-23P01705 113 aa11.58□□□□□ -0.56
TRIM13-202ENST00000378182 PAX9P55771 341 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 MGAMO43451 1857 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE12BA1L429 117 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE7O76087 117 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 NMBP08949 121 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE12FP0CL80 117 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE12GP0CL81 117 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE12IP0CL82 117 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 DDTP30046 118 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 F2Z2F3 143 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 C18orf12Q96KH6 178 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 SPXQ9BT56 116 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 TRAV25A0A0B4J276 109 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 DUTP33316 252 aaKnown RBP11.57□□□□□ -0.56
TRIM13-202ENST00000378182 EFNB3Q15768 340 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 A0A1B0GW15 77 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 UCP1P25874 307 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 MINOS1Q5TGZ0 78 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 ATP5L2Q7Z4Y8 100 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 NIT1Q86X76 327 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 NABP1Q96AH0 204 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 RHPN1-AS1Q9BWJ2 59 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 MINOS1-NBL1R4GNA1 71 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 CEP290O15078 2479 aa11.57□□□□□ -0.56
TRIM13-202ENST00000378182 SPINK13Q1W4C9 94 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 DERL1Q9BUN8 251 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 PRDM13Q9H4Q3 707 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 PLSCR4Q9NRQ2 329 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 APOC4P55056 127 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 NR2C2APQ86WQ0 139 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 WDR90Q96KV7 1748 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 A8MXK9 166 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 CD177Q8N6Q3 437 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 ZNRD1Q9P1U0 126 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 VWC2LB2RUY7 222 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 LEPROTO15243 131 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 TNFSF13O75888 250 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 A0A087WV48 116 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 TRBV6-7A0A0A0MS04 114 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 TRAV3A0A0B4J244 114 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 E7EQL1 145 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 SMKR1H3BMG3 65 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 EFNA2O43921 213 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 LINC00205P59089 165 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms