RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 C17orf100A8MU93 164 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 RNF125Q96EQ8 232 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 ZNF479Q96JC4 524 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 MS4A6AQ9H2W1 248 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 TRBV7-9A0A0J9YWB2 115 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 PSMG4Q5JS54 123 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 ZNF664Q8N3J9 261 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 OR2K2Q8NGT1 345 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 ZSWIM8A7E2V4 1837 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 B4DSR2 109 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 TDGF1P3P51864 188 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 ATP5L2Q7Z4Y8 100 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 LHFPL1Q86WI0 220 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 CRYGSP22914 178 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 ZIC4Q8N9L1 334 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 A0A087X0K7 114 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 BMPERQ8N8U9 685 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 TRPM7Q96QT4 1865 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 IGKV2-40A0A087WW87 121 aaPredicted RBP9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 C5orf63A6NC05 138 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 IGKV2D-40P01614 121 aaPredicted RBP9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 CNTFRP26992 372 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 PVRIGQ6DKI7 326 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 SPAG8Q99932 426 aaPredicted RBP9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 AGMATQ9BSE5 352 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 FOXF2Q12947 444 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 IGLV3-32A0A0A0MS00 114 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 RBMY1BA6NDE4 496 aaKnown RBP9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 RBMY1EA6NEQ0 496 aaKnown RBP9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 EFNA2O43921 213 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 RBMY1DP0C7P1 496 aaKnown RBP9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 RBMY1A1P0DJD3 496 aaKnown RBP9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 RBMY1CP0DJD4 496 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 NABP1Q96AH0 204 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 SLC25A2Q9BXI2 301 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 FAM90A9PA6NNJ1 464 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 TMEM42Q69YG0 159 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 IFI27L1Q96BM0 104 aa9.88□□□□□ -0.83
PCDHA9-201ENST00000378122 A0A0G2JNJ9 132 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 LINC01551Q86U37 167 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 ZNF581Q9P0T4 197 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 Q9UFV3 132 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 NDUFS8O00217 210 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 ESDP10768 282 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 TMEM155Q4W5P6 130 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 GGTLC1Q9BX51 225 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 A0A096LPF7 62 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 IGLV3-19P01714 112 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 PSG1P11464 419 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 VMO1Q7Z5L0 202 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 ASCL2Q99929 193 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 KLHDC3Q9BQ90 382 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 WDR83OSQ9Y284 106 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 CEP250Q9BV73 2442 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 EFNA4P52798 201 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 CHCHD5Q9BSY4 110 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 TMEM133Q9H2Q1 129 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 TRAV3A0A0B4J244 114 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 TRAV1-1A0A0B4J248 108 aa9.87□□□□□ -0.83
PCDHA9-201ENST00000378122 IGLV3-12A0A075B6K2 115 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 A8MWV9 139 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 K7ENP7 123 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 MLNRO43193 412 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 LCN12Q6JVE5 192 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 TPTE2P1Q5T6R2 138 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 NCR2O95944 276 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 HOXD3P31249 432 aaPredicted RBP9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 PLA2G5P39877 138 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 PNRC2Q9NPJ4 139 aaKnown RBP9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 TRAV21A0A0B4J279 112 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 D6R8Y8 96 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 H3BUX3 64 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 WNT2P09544 360 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 DEFB130BP0DP73 79 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 DEFB130AP0DP74 79 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 GUSBP1Q15486 140 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 GTF3AQ92664 365 aaKnown RBP9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 EXOC3-AS1Q8N2X6 119 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 DYSFO75923 2080 aa9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 LSM4Q9Y4Z0 139 aaKnown RBP9.86□□□□□ -0.83
PCDHA9-201ENST00000378122 C3orf79P0CE67 100 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 FOXG1P55316 489 aaPredicted RBP9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 MYOD1P15172 320 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 IFI27P40305 119 aaPredicted RBP9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 BPESC1Q9GZL8 116 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 LAGE3Q14657 143 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 NUP35Q8NFH5 326 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 SLC50A1Q9BRV3 221 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 LYL1P12980 280 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 NDPQ00604 133 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 UBE2V1Q13404 147 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 IGKV1-5P01602 117 aa9.85□□□□□ -0.83
PCDHA9-201ENST00000378122 PRTN3P24158 256 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 CD300EQ496F6 205 aaPredicted RBP9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 LOC102723996A0A087X1L8 192 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 NPIPB5A8MRT5 1133 aa9.84□□□□□ -0.83
PCDHA9-201ENST00000378122 GGNQ86UU5 652 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms