RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 FAM90A26D6RGX4 464 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 GATCO43716 136 aaKnown RBP6.49□□□□□ -1.37
CKAP2-203ENST00000378037 FRMD6-AS1P0C7T7 363 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 S100A4P26447 101 aaKnown RBP6.49□□□□□ -1.37
CKAP2-203ENST00000378037 TMEM177Q53S58 311 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 CIARTQ8N365 385 aaPredicted RBP6.49□□□□□ -1.37
CKAP2-203ENST00000378037 RNF182Q8N6D2 247 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 OR52E5Q8NH55 327 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 THYN1Q9P016 225 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 TET2Q6N021 2002 aaPredicted RBP6.49□□□□□ -1.37
CKAP2-203ENST00000378037 IGKV2-40A0A087WW87 121 aaPredicted RBP6.49□□□□□ -1.37
CKAP2-203ENST00000378037 ATP6V0E1O15342 81 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 FCN3O75636 299 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 IGKV2D-40P01614 121 aaPredicted RBP6.49□□□□□ -1.37
CKAP2-203ENST00000378037 LYL1P12980 280 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 GATA4P43694 442 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 IBA57Q5T440 356 aaKnown RBP6.49□□□□□ -1.37
CKAP2-203ENST00000378037 TPTE2P1Q5T6R2 138 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 ISLRO14498 428 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 ZNF253O75346 499 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 CD5P06127 495 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 AGAP20933 346 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 CCDC144NLQ6NUI1 221 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 OR1L6Q8NGR2 347 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 NEU4Q8WWR8 484 aaPredicted RBP6.48□□□□□ -1.37
CKAP2-203ENST00000378037 PMCHL1Q16048 86 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 DEFB136Q30KP8 78 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 LDLRAD2Q5SZI1 272 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 C16orf54Q6UWD8 224 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 TMEM170AQ8WVE7 144 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 C1RLQ9NZP8 487 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 NDUFB8O95169 186 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 AMTP48728 403 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 Q6ZSR3 168 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 TMEM144Q7Z5S9 345 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 TMEM75Q8N9X5 138 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 KLK15Q9H2R5 256 aa6.48□□□□□ -1.37
CKAP2-203ENST00000378037 FBLN7Q53RD9 439 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 ZNF506Q5JVG8 444 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 CENPVQ7Z7K6 275 aaPredicted RBP6.47□□□□□ -1.37
CKAP2-203ENST00000378037 Q96MF0 132 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 RNF2Q99496 336 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 NPIPB5A8MRT5 1133 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 CORTO00230 105 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 VDAC2P45880 294 aaPredicted RBP6.47□□□□□ -1.37
CKAP2-203ENST00000378037 ZNF138P52744 262 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 S100A12P80511 92 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 TOMM20LQ6UXN7 152 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 ZNF705AQ6ZN79 300 aaPredicted RBP6.47□□□□□ -1.37
CKAP2-203ENST00000378037 Q6ZS49 121 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 Q8N7P7 452 aa6.47□□□□□ -1.37
CKAP2-203ENST00000378037 GAR1Q9NY12 217 aaKnown RBP6.47□□□□□ -1.37
CKAP2-203ENST00000378037 RAI1Q7Z5J4 1906 aaPredicted RBP6.47□□□□□ -1.37
CKAP2-203ENST00000378037 P01737 135 aa6.46□□□□□ -1.37
CKAP2-203ENST00000378037 IQCJQ1A5X6 159 aa6.46□□□□□ -1.37
CKAP2-203ENST00000378037 C5orf64Q2M2E5 130 aa6.46□□□□□ -1.37
CKAP2-203ENST00000378037 ETFRF1Q6IPR1 90 aa6.46□□□□□ -1.37
CKAP2-203ENST00000378037 C16orf92Q96LL3 132 aa6.46□□□□□ -1.37
CKAP2-203ENST00000378037 HSPB9Q9BQS6 159 aa6.46□□□□□ -1.37
CKAP2-203ENST00000378037 MANBALQ9NQG1 85 aa6.46□□□□□ -1.37
CKAP2-203ENST00000378037 YAE1D1Q9NRH1 226 aa6.46□□□□□ -1.37
CKAP2-203ENST00000378037 MUC4Q99102 2169 aa6.46□□□□□ -1.37
CKAP2-203ENST00000378037 HSBP1O75506 76 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 MFAP4P55083 255 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 FAM90A2PQ658T7 463 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 C10orf99Q6UWK7 81 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 C11orf42Q8N5U0 333 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 DPF1Q92782 380 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 TMEM167BQ9NRX6 74 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 TMEM14BQ9NUH8 114 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 KLF2Q9Y5W3 355 aaPredicted RBP6.46□□□□□ -1.38
CKAP2-203ENST00000378037 F5H697 171 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 IGHV4-59P01825 116 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 TEX36Q5VZQ5 186 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 OR5AN1Q8NGI8 311 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 RNF125Q96EQ8 232 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 SFRP2Q96HF1 295 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 PSMG3Q9BT73 122 aaPredicted RBP6.46□□□□□ -1.38
CKAP2-203ENST00000378037 Q9H3A6 140 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 PAM16Q9Y3D7 125 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 MXRA5Q9NR99 2828 aa6.46□□□□□ -1.38
CKAP2-203ENST00000378037 NPFFO15130 113 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 SCGB2A1O75556 95 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 BPIFA4PQ86YQ2 179 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 KDF1Q8NAX2 398 aaPredicted RBP6.45□□□□□ -1.38
CKAP2-203ENST00000378037 ZNF738Q8NE65 137 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 BORCS7Q96B45 105 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 SDF2L1Q9HCN8 221 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 APCP25054 2843 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 NSD1Q96L73 2696 aaPredicted RBP6.45□□□□□ -1.38
CKAP2-203ENST00000378037 COLCA2A8K830 154 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 K7EQM0 130 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 IGHV2-70P01814 119 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 FABP1P07148 127 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 CRISP2P16562 243 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 SRIP30626 198 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 ARL3P36405 182 aa6.45□□□□□ -1.38
CKAP2-203ENST00000378037 HIST1H1AQ02539 215 aaPredicted RBP6.45□□□□□ -1.38
CKAP2-203ENST00000378037 Q5PR19 223 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms