RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 SRSF12Q8WXF0 261 aaKnown RBP12.75□□□□□ -0.37
CKAP4-201ENST00000378026 F11RQ9Y624 299 aaKnown RBP12.75□□□□□ -0.37
CKAP4-201ENST00000378026 A0A0G2JLM5 398 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 C9orf118A6NHY6 69 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 G3V4G9 280 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 TCRAP04437 139 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 SEC11AP67812 179 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 MDS2Q8NDY4 140 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 OR2K2Q8NGT1 345 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 DIAPH2-AS1Q14236 149 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 C1orf185Q5T7R7 199 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 UFSP1Q6NVU6 142 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 GOLT1AQ6ZVE7 132 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 EXOC3-AS1Q8N2X6 119 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 PERPQ96FX8 193 aa12.74□□□□□ -0.37
CKAP4-201ENST00000378026 SERTM2A0A1B0GWG4 89 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 SPOCK3Q9BQ16 436 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 FBLL1A6NHQ2 334 aaKnown RBP12.73□□□□□ -0.37
CKAP4-201ENST00000378026 C22orf46C9J442 243 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 GNG7O60262 68 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 LTAP01374 205 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
CKAP4-201ENST00000378026 RPL24P83731 157 aaKnown RBP12.73□□□□□ -0.37
CKAP4-201ENST00000378026 KLF12Q9Y4X4 402 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 LAMA5O15230 3695 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 A6NDN8 102 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 KIR2DL2P43627 348 aaPredicted RBP12.73□□□□□ -0.37
CKAP4-201ENST00000378026 NMUP48645 174 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 MZT1Q08AG7 82 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 C9orf106Q8NAJ2 232 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 OR4A5Q8NH83 315 aa12.73□□□□□ -0.37
CKAP4-201ENST00000378026 CFHR2P36980 270 aa12.72□□□□□ -0.37
CKAP4-201ENST00000378026 CSN1S1P47710 185 aa12.72□□□□□ -0.37
CKAP4-201ENST00000378026 MBNL2Q5VZF2 373 aaKnown RBP12.72□□□□□ -0.37
CKAP4-201ENST00000378026 FMC1Q96HJ9 113 aa12.72□□□□□ -0.37
CKAP4-201ENST00000378026 SOX21Q9Y651 276 aaPredicted RBP12.72□□□□□ -0.37
CKAP4-201ENST00000378026 CGB1A6NKQ9 187 aa12.72□□□□□ -0.37
CKAP4-201ENST00000378026 K7EP34 96 aa12.72□□□□□ -0.37
CKAP4-201ENST00000378026 CACNG7P62955 275 aa12.72□□□□□ -0.37
CKAP4-201ENST00000378026 SLC25A48Q6ZT89 311 aaKnown RBP12.72□□□□□ -0.37
CKAP4-201ENST00000378026 TPSG1Q9NRR2 321 aa12.72□□□□□ -0.37
CKAP4-201ENST00000378026 SPCS1Q9Y6A9 102 aa12.72□□□□□ -0.37
CKAP4-201ENST00000378026 A0A1W2PNU3 283 aaPredicted RBP12.71□□□□□ -0.37
CKAP4-201ENST00000378026 M0R1B8 84 aa12.71□□□□□ -0.37
CKAP4-201ENST00000378026 CEP250Q9BV73 2442 aa12.71□□□□□ -0.37
CKAP4-201ENST00000378026 TMSB15BA0A087X1C1 80 aa12.71□□□□□ -0.38
CKAP4-201ENST00000378026 A0A1B0GUT8 65 aa12.71□□□□□ -0.38
CKAP4-201ENST00000378026 H3BRM9 83 aa12.71□□□□□ -0.38
CKAP4-201ENST00000378026 FGF6P10767 208 aa12.71□□□□□ -0.38
CKAP4-201ENST00000378026 CCL3L1P16619 93 aa12.71□□□□□ -0.38
CKAP4-201ENST00000378026 MEF2CQ06413 473 aaPredicted RBP12.71□□□□□ -0.38
CKAP4-201ENST00000378026 DSCAML1Q8TD84 2053 aa12.71□□□□□ -0.38
CKAP4-201ENST00000378026 SLC25A17O43808 307 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 ATP5IP56385 69 aaPredicted RBP12.7□□□□□ -0.38
CKAP4-201ENST00000378026 PLP1P60201 277 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 RPUSD1Q9UJJ7 312 aaKnown RBP12.7□□□□□ -0.38
CKAP4-201ENST00000378026 IGHV3-72A0A0B4J1Y9 119 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 A1L4Q6 167 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 CT83Q5H943 113 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 PCP2Q8IVA1 136 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 GUCD1Q96NT3 240 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 RAB9BQ9NP90 201 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 TPRP12270 2363 aaKnown RBP12.7□□□□□ -0.38
CKAP4-201ENST00000378026 HAX1O00165 279 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 SUB1P53999 127 aaKnown RBP eCLIP12.7□□□□□ -0.38
CKAP4-201ENST00000378026 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 JKAMPQ9P055 326 aa12.7□□□□□ -0.38
CKAP4-201ENST00000378026 S100A7AQ86SG5 101 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 Q86TA4 180 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 STXBP6Q8NFX7 210 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 OSR1Q8TAX0 266 aaPredicted RBP12.69□□□□□ -0.38
CKAP4-201ENST00000378026 ZNF492Q9P255 531 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 KALRNO60229 2985 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
CKAP4-201ENST00000378026 LYZP61626 148 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 OR5AN1Q8NGI8 311 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 RITA1Q96K30 269 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 GAFA1Q96PS6 74 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 GFRA4Q9GZZ7 299 aa12.69□□□□□ -0.38
CKAP4-201ENST00000378026 ZNF207O43670 478 aaKnown RBP12.68□□□□□ -0.38
CKAP4-201ENST00000378026 A0A1W2PPI3 338 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 A0A1W2PRD5 423 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 A0A1W2PRF3 423 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 A0A1W2PRM7 423 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 CIDEAO60543 219 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 LHBP01229 141 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 SPRY4Q9C004 299 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 DMXL2Q8TDJ6 3036 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 GP9P14770 177 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 TMEM164Q5U3C3 297 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 VSTM2AQ8TAG5 236 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 RNF7Q9UBF6 113 aa12.68□□□□□ -0.38
CKAP4-201ENST00000378026 D6R8Y8 96 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 K7EMI3 77 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 ZCCHC24Q8N2G6 241 aaKnown RBP12.67□□□□□ -0.38
CKAP4-201ENST00000378026 THAP8Q8NA92 274 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 OR10X1Q8NGY0 326 aa12.67□□□□□ -0.38
CKAP4-201ENST00000378026 GTSF1LQ9H1H1 148 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms