RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 C2orf16Q68DN1 1984 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 C17orf98A8MV24 154 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 TMEM50AO95807 157 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 OR5AN1Q8NGI8 311 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 SCGB3A1Q96QR1 104 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 PIEZO2Q9H5I5 2752 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 ZNF257Q9Y2Q1 563 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 NBEAP1P0C6P0 100 aa8.93□□□□□ -0.98
HIF3A-205ENST00000377670 COL8A2P25067 703 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 OR13C6PQ8NH95 151 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 GLMPQ8WWB7 406 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 GATA2P23769 480 aaPredicted RBP8.92□□□□□ -0.98
HIF3A-205ENST00000377670 PAPPA-AS1Q5QFB9 102 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 ZNF329Q86UD4 541 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 IGKV1D-8A0A087WSZ0 117 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 A0A0A6YYD4 124 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 DLEU1O43261 78 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 ZNF581Q9P0T4 197 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 ABCA1O95477 2261 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 IGHV2-26A0A0B4J1V2 119 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 NABP1Q96AH0 204 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 IFI27L2Q9H2X8 130 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 ATP5LO75964 103 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 PSMG4Q5JS54 123 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 FMC1Q96HJ9 113 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 KLF2Q9Y5W3 355 aaPredicted RBP8.92□□□□□ -0.98
HIF3A-205ENST00000377670 LAMA3Q16787 3333 aa8.92□□□□□ -0.98
HIF3A-205ENST00000377670 LAMA2P24043 3122 aaKnown RBP8.91□□□□□ -0.98
HIF3A-205ENST00000377670 E7EQL1 145 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 LCN12Q6JVE5 192 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 PLPPR1Q8TBJ4 325 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 A0A087WX48 190 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 M0R381 172 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 FHL1Q13642 323 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 TMEM155Q4W5P6 130 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 PRADC1Q9BSG0 188 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 MRPS16Q9Y3D3 137 aaKnown RBP8.91□□□□□ -0.98
HIF3A-205ENST00000377670 PLXNA2O75051 1894 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 IGKV1-12A0A0C4DH73 117 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 IGKV1D-12P01611 117 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 ZNF474Q6S9Z5 364 aaPredicted RBP8.91□□□□□ -0.98
HIF3A-205ENST00000377670 TEX45Q8NA69 505 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 VCX2Q9H322 139 aa8.91□□□□□ -0.98
HIF3A-205ENST00000377670 TNFSF13O75888 250 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 GNG5P63218 68 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 TPTE2P1Q5T6R2 138 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 BEND2Q8NDZ0 799 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 COL4A3Q01955 1670 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 GTF3C1Q12789 2109 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 IGHV4-39P01824 125 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 ORAOV1Q8WV07 137 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 VSIRQ9H7M9 311 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 RPUSD1Q9UJJ7 312 aaKnown RBP8.9□□□□□ -0.98
HIF3A-205ENST00000377670 SELLP14151 372 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 PCDH15Q96QU1 1955 aa8.9□□□□□ -0.98
HIF3A-205ENST00000377670 OR10J3Q5JRS4 329 aa8.9□□□□□ -0.99
HIF3A-205ENST00000377670 ORMDL3Q8N138 153 aa8.9□□□□□ -0.99
HIF3A-205ENST00000377670 GTF3AQ92664 365 aaKnown RBP8.9□□□□□ -0.99
HIF3A-205ENST00000377670 SELENOKQ9Y6D0 94 aa8.9□□□□□ -0.99
HIF3A-205ENST00000377670 CD55P08174 381 aa8.9□□□□□ -0.99
HIF3A-205ENST00000377670 CKS1BP61024 79 aa8.9□□□□□ -0.99
HIF3A-205ENST00000377670 MAJINQ3KP22 176 aa8.9□□□□□ -0.99
HIF3A-205ENST00000377670 RUSC1-AS1Q66K80 236 aa8.9□□□□□ -0.99
HIF3A-205ENST00000377670 OR52E5Q8NH55 327 aa8.9□□□□□ -0.99
HIF3A-205ENST00000377670 CACNA1AO00555 2505 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 NOTCH2Q04721 2471 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 IGKV1-27A0A075B6S5 117 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 CD7P09564 240 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 FOXL1Q12952 345 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 SAA2-SAA4A0A096LPE2 208 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 IGKV1D-13A0A0B4J2D9 117 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 SAA2P0DJI9 122 aaPredicted RBP8.89□□□□□ -0.99
HIF3A-205ENST00000377670 IGKV1-13P0DP09 117 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 NUDT10Q8NFP7 164 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 NAA38Q9BRA0 125 aaKnown RBP8.89□□□□□ -0.99
HIF3A-205ENST00000377670 B3GALT5-AS1P59052 145 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 PYY3Q5JQD4 70 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 TMEM42Q69YG0 159 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 RPRMLQ8N4K4 120 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 TOMM7Q9P0U1 55 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 CREBBPQ92793 2442 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 LRRK1Q38SD2 2015 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 OCC1Q8TAD7 63 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 Q9H3A6 140 aa8.89□□□□□ -0.99
HIF3A-205ENST00000377670 NAPSAO96009 420 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 IGHV1-8P0DP01 117 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 SAA4P35542 130 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 OR2K2Q8NGT1 345 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 TRGV11A0A075B6L2 103 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 CACNG7P62955 275 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 MED13Q9UHV7 2174 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.88□□□□□ -0.99
HIF3A-205ENST00000377670 ZNF688P0C7X2 276 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 SAA1P0DJI8 122 aaPredicted RBP8.88□□□□□ -0.99
HIF3A-205ENST00000377670 CGB3P0DN86 165 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 CHCHD5Q9BSY4 110 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 CYTL1Q9NRR1 136 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 APOC4P55056 127 aa8.88□□□□□ -0.99
HIF3A-205ENST00000377670 C1orf194Q5T5A4 169 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms