RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 COX7A1P24310 79 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 CTRLP40313 264 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 PRR27Q6MZM9 219 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 OR11H6Q8NGC7 330 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 OR4B1Q8NGF8 309 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 FAM103A1Q9BTL3 118 aaKnown RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 SLC25A39Q9BZJ4 359 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 GFRA4Q9GZZ7 299 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 RPP21Q9H633 154 aaKnown RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 SOX21Q9Y651 276 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 ATMQ13315 3056 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 NPIPB6E9PJ23 425 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 M0QZK8 103 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 KRTDAPP60985 99 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 FOXC1Q12948 553 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 OR8B3Q8NGG8 313 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 OR8B2Q96RD0 313 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 WNT10AQ9GZT5 417 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 MALRD1Q5VYJ5 2156 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 GVINP1Q7Z2Y8 2422 aa9.32□□□□□ -0.92
TNFRSF9-201ENST00000377507 A8MWL6 223 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 K7EIM0 57 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 IGLV2-11P01706 119 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 PMCHP20382 165 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 C16orf54Q6UWD8 224 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 NPBQ8NG41 125 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 GTSF1Q8WW33 167 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 CFHR4Q92496 578 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 SGK494Q96LW2 274 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 RASL11BQ9BPW5 248 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 SCNM1Q9BWG6 230 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 PAM16Q9Y3D7 125 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 ADGRG4Q8IZF6 3080 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 APC2O95996 2303 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 MAP1BP46821 2468 aaKnown RBP9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 TIMM23O14925 209 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 DPM3Q9P2X0 92 aa9.31□□□□□ -0.92
TNFRSF9-201ENST00000377507 NDUFA3O95167 84 aa9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 P01737 135 aa9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 HTR1DP28221 377 aa9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 GRNP28799 593 aaKnown RBP9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 LYZP61626 148 aa9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 HBBP68871 147 aa9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 ZNF705AQ6ZN79 300 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 FAM19A2Q8N3H0 131 aa9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 SHANK2-AS3Q9BTD1 123 aa9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 RNF24Q9Y225 148 aa9.3□□□□□ -0.92
TNFRSF9-201ENST00000377507 NBR2O15453 112 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 FOXA3P55318 350 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 TCF24Q7RTU0 167 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 Q86TA4 180 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 POLEQ07864 2286 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 TRBV19A0A075B6N1 114 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 A6NNC1 897 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 FAM90A27PA6NNH2 459 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 ZNF785A8K8V0 405 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 ODF3BA8MYP8 253 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 H3BTX0 84 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 M0R1W7 72 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 OVOL3O00110 214 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 TCAPO15273 167 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 IGLC2P0DOY2 106 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 CAMPP49913 170 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 PLGLAQ15195 96 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 RBPMS2Q6ZRY4 209 aaKnown RBP9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 LYPD1Q8N2G4 141 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 ZNF491Q8N8L2 437 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 SSBP4Q9BWG4 385 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 RAB1BQ9H0U4 201 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 ONECUT1Q9UBC0 465 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 RPH3ALQ9UNE2 315 aa9.29□□□□□ -0.92
TNFRSF9-201ENST00000377507 H3BRN7 92 aa9.28□□□□□ -0.92
TNFRSF9-201ENST00000377507 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
TNFRSF9-201ENST00000377507 CNIH1O95406 144 aa9.28□□□□□ -0.92
TNFRSF9-201ENST00000377507 GPR6P46095 362 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF9-201ENST00000377507 BORCS7Q96B45 105 aa9.28□□□□□ -0.92
TNFRSF9-201ENST00000377507 URB1-AS1Q96HZ7 61 aa9.28□□□□□ -0.92
TNFRSF9-201ENST00000377507 ZNF48Q96MX3 618 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF9-201ENST00000377507 WI2-2373I1.2A0A1W2PRP0 233 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 HSBP1O75506 76 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 APOHP02749 345 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 PRTN3P24158 256 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 CEACAM3P40198 252 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 FAM162BQ5T6X4 162 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 C11orf71Q6IPW1 123 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 SIGLEC15Q6ZMC9 328 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 BPIFA4PQ86YQ2 179 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 EXOC3-AS1Q8N2X6 119 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 OR2D3Q8NGH3 330 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 DAZAP1Q96EP5 407 aaKnown RBP9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 DMXL2Q8TDJ6 3036 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 TRAV8-1A0A0A6YYK1 113 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 FAM181BA6NEQ2 426 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 CCL21O00585 134 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 NTF3P20783 257 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 ARF6P62330 175 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms