RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 DNAH11Q96DT5 4516 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 IGHV4-28A0A0C4DH34 117 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 C9orf170A2RU37 121 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 SNRPGP15A8MWD9 76 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 SCGB1D2O95969 90 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 SLC25A6P12236 298 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 C4orf46Q504U0 113 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 OR8G2PQ6IF36 304 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 COQ8AQ8NI60 647 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 SLC25A22Q9H936 323 aa13.87□□□□□ -0.19
CBWD3-204ENST00000377349 PKD1P98161 4303 aa13.86□□□□□ -0.19
CBWD3-204ENST00000377349 NAP1L6A6NFF2 107 aa13.86□□□□□ -0.19
CBWD3-204ENST00000377349 CENPXA8MT69 81 aa13.86□□□□□ -0.19
CBWD3-204ENST00000377349 NDUFB6O95139 128 aa13.86□□□□□ -0.19
CBWD3-204ENST00000377349 DEFB1P60022 68 aa13.86□□□□□ -0.19
CBWD3-204ENST00000377349 TMEM41BQ5BJD5 291 aa13.86□□□□□ -0.19
CBWD3-204ENST00000377349 XCL2Q9UBD3 114 aa13.86□□□□□ -0.19
CBWD3-204ENST00000377349 TBC1D24Q9ULP9 559 aa13.86□□□□□ -0.19
CBWD3-204ENST00000377349 STRAPQ9Y3F4 350 aaKnown RBP13.86□□□□□ -0.19
CBWD3-204ENST00000377349 X6R8D5 127 aa13.86□□□□□ -0.19
CBWD3-204ENST00000377349 IGLL5B9A064 214 aa13.85□□□□□ -0.19
CBWD3-204ENST00000377349 SSSCA1O60232 199 aa13.85□□□□□ -0.19
CBWD3-204ENST00000377349 IFNA21P01568 189 aa13.85□□□□□ -0.19
CBWD3-204ENST00000377349 ANXA7P20073 488 aaKnown RBP13.85□□□□□ -0.19
CBWD3-204ENST00000377349 FXYD7P58549 80 aa13.85□□□□□ -0.19
CBWD3-204ENST00000377349 UBE2MP61081 183 aaKnown RBP13.85□□□□□ -0.19
CBWD3-204ENST00000377349 OR8I2Q8N0Y5 310 aa13.85□□□□□ -0.19
CBWD3-204ENST00000377349 TRGV9Q99603 122 aa13.85□□□□□ -0.19
CBWD3-204ENST00000377349 WDR12Q9GZL7 423 aaKnown RBP13.85□□□□□ -0.19
CBWD3-204ENST00000377349 ZNF705EA8MWA4 302 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-204ENST00000377349 C11orf94C9JXX5 98 aa13.84□□□□□ -0.19
CBWD3-204ENST00000377349 GATA2P23769 480 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-204ENST00000377349 ID1P41134 155 aa13.84□□□□□ -0.19
CBWD3-204ENST00000377349 NUTF2P61970 127 aaKnown RBP13.84□□□□□ -0.19
CBWD3-204ENST00000377349 POLR2GP62487 172 aaKnown RBP eCLIP13.84□□□□□ -0.19
CBWD3-204ENST00000377349 ACOT7LQ6ZUV0 252 aa13.84□□□□□ -0.19
CBWD3-204ENST00000377349 IGKV1OR2-108A0A075B7D4 117 aa13.83□□□□□ -0.2
CBWD3-204ENST00000377349 ELOA3CA0A087WX78 387 aaPredicted RBP13.83□□□□□ -0.2
CBWD3-204ENST00000377349 OR4E1P0C645 316 aa13.83□□□□□ -0.2
CBWD3-204ENST00000377349 ORM2P19652 201 aa13.83□□□□□ -0.2
CBWD3-204ENST00000377349 HLA-DMBP28068 263 aa13.83□□□□□ -0.2
CBWD3-204ENST00000377349 Q6ZTC4 211 aa13.83□□□□□ -0.2
CBWD3-204ENST00000377349 CSNK1G2-AS1Q8NCQ2 148 aa13.83□□□□□ -0.2
CBWD3-204ENST00000377349 PSENENQ9NZ42 101 aa13.83□□□□□ -0.2
CBWD3-204ENST00000377349 IGHV3OR16-12A0A075B7B8 117 aa13.82□□□□□ -0.2
CBWD3-204ENST00000377349 MIFP14174 115 aa13.82□□□□□ -0.2
CBWD3-204ENST00000377349 NKX2-1P43699 371 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-204ENST00000377349 GDF5OSQ5U4N7 250 aa13.82□□□□□ -0.2
CBWD3-204ENST00000377349 THAP8Q8NA92 274 aa13.82□□□□□ -0.2
CBWD3-204ENST00000377349 BPIFCQ8NFQ6 507 aa13.82□□□□□ -0.2
CBWD3-204ENST00000377349 OR4B1Q8NGF8 309 aa13.82□□□□□ -0.2
CBWD3-204ENST00000377349 OR1B1Q8NGR6 318 aa13.82□□□□□ -0.2
CBWD3-204ENST00000377349 C1QTNF4Q9BXJ3 329 aa13.82□□□□□ -0.2
CBWD3-204ENST00000377349 DOK5Q9P104 306 aa13.82□□□□□ -0.2
CBWD3-204ENST00000377349 H3BMM0 161 aa13.81□□□□□ -0.2
CBWD3-204ENST00000377349 IL7P13232 177 aa13.81□□□□□ -0.2
CBWD3-204ENST00000377349 RRAS2P62070 204 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-204ENST00000377349 GSKIPQ9P0R6 139 aa13.81□□□□□ -0.2
CBWD3-204ENST00000377349 ABCA13Q86UQ4 5058 aa13.81□□□□□ -0.2
CBWD3-204ENST00000377349 HLA-DRB4P13762 266 aa13.81□□□□□ -0.2
CBWD3-204ENST00000377349 ZNF767PQ75MW2 155 aa13.81□□□□□ -0.2
CBWD3-204ENST00000377349 C16orf92Q96LL3 132 aa13.81□□□□□ -0.2
CBWD3-204ENST00000377349 SDHCQ99643 169 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-204ENST00000377349 TMEM147Q9BVK8 224 aa13.81□□□□□ -0.2
CBWD3-204ENST00000377349 HLA-DRB4X5D2U9 266 aa13.81□□□□□ -0.2
CBWD3-204ENST00000377349 IGHV4-4A0A075B6R2 117 aa13.8□□□□□ -0.2
CBWD3-204ENST00000377349 BTCP35070 178 aa13.8□□□□□ -0.2
CBWD3-204ENST00000377349 GALR1P47211 349 aa13.8□□□□□ -0.2
CBWD3-204ENST00000377349 PSMB3P49720 205 aa13.8□□□□□ -0.2
CBWD3-204ENST00000377349 FGL1Q08830 312 aa13.8□□□□□ -0.2
CBWD3-204ENST00000377349 C1orf194Q5T5A4 169 aa13.8□□□□□ -0.2
CBWD3-204ENST00000377349 SLC25A32Q9H2D1 315 aa13.8□□□□□ -0.2
CBWD3-204ENST00000377349 SEPSECSQ9HD40 501 aaKnown RBP13.8□□□□□ -0.2
CBWD3-204ENST00000377349 CELA1Q9UNI1 258 aa13.8□□□□□ -0.2
CBWD3-204ENST00000377349 PRSS46E5RG02 174 aa13.79□□□□□ -0.2
CBWD3-204ENST00000377349 F6UB75 175 aa13.79□□□□□ -0.2
CBWD3-204ENST00000377349 EMP1P54849 157 aa13.79□□□□□ -0.2
CBWD3-204ENST00000377349 IAH1Q2TAA2 248 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-204ENST00000377349 TMEM182Q6ZP80 229 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-204ENST00000377349 RSG1Q9BU20 258 aa13.79□□□□□ -0.2
CBWD3-204ENST00000377349 TRAV10A0A0B4J240 114 aa13.78□□□□□ -0.2
CBWD3-204ENST00000377349 CCNKO75909 580 aa13.78□□□□□ -0.2
CBWD3-204ENST00000377349 CFDP00746 253 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-204ENST00000377349 IL5P05113 134 aa13.78□□□□□ -0.2
CBWD3-204ENST00000377349 METTL15P1P0C7V9 234 aa13.78□□□□□ -0.2
CBWD3-204ENST00000377349 ID3Q02535 119 aa13.78□□□□□ -0.2
CBWD3-204ENST00000377349 EBLN2Q6P2I7 272 aa13.78□□□□□ -0.2
CBWD3-204ENST00000377349 FOXI2Q6ZQN5 318 aa13.78□□□□□ -0.2
CBWD3-204ENST00000377349 OR4D5Q8NGN0 318 aa13.78□□□□□ -0.2
CBWD3-204ENST00000377349 C7orf50Q9BRJ6 194 aaKnown RBP13.78□□□□□ -0.2
CBWD3-204ENST00000377349 C20orf85Q9H1P6 137 aa13.78□□□□□ -0.2
CBWD3-204ENST00000377349 SAV1Q9H4B6 383 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-204ENST00000377349 ZNF98A6NK75 572 aa13.77□□□□□ -0.21
CBWD3-204ENST00000377349 FAM25EA8MYX2 175 aa13.77□□□□□ -0.21
CBWD3-204ENST00000377349 SCRT1Q9BWW7 348 aa13.77□□□□□ -0.21
CBWD3-204ENST00000377349 TRAV6A0A075B6T7 132 aa13.76□□□□□ -0.21
CBWD3-204ENST00000377349 A0A1B0GVY2 172 aa13.76□□□□□ -0.21
CBWD3-204ENST00000377349 ISLRO14498 428 aa13.76□□□□□ -0.21
CBWD3-204ENST00000377349 SOCS3O14543 225 aa13.76□□□□□ -0.21
CBWD3-204ENST00000377349 CCSO14618 274 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms