RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 APOMO95445 188 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 NAPSAO96009 420 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 LINC00205P59089 165 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 TRGV9Q99603 122 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 GATA3P23771 443 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 GLRX5Q86SX6 157 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 GZMBP10144 247 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 PRTN3P24158 256 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 NUDT10Q8NFP7 164 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 CEP250Q9BV73 2442 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 OCC1Q8TAD7 63 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 FREM3P0C091 2139 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 PSCAO43653 123 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 MGST2Q99735 147 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 ADMP35318 185 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 NBL1P41271 181 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 IGFL3Q6UXB1 125 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 ZNF581Q9P0T4 197 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 CA1P00915 261 aaPredicted RBP11.11□□□□□ -0.63
GPC6-201ENST00000377047 IGFL4Q6B9Z1 124 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 DEFB104AQ8WTQ1 72 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 A0A087WWC5 75 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 DDTP30046 118 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 SLC25A20O43772 301 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 IGKV1-5P01602 117 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 C9orf139Q6ZV77 190 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 RHPN1-AS1Q9BWJ2 59 aa11.11□□□□□ -0.63
GPC6-201ENST00000377047 ORMDL2Q53FV1 153 aa11.1□□□□□ -0.63
GPC6-201ENST00000377047 C1QL4Q86Z23 238 aa11.1□□□□□ -0.63
GPC6-201ENST00000377047 INSP01308 110 aa11.1□□□□□ -0.63
GPC6-201ENST00000377047 IGHV3-64A0A075B6Q5 118 aa11.1□□□□□ -0.63
GPC6-201ENST00000377047 ZNF138P52744 262 aa11.1□□□□□ -0.63
GPC6-201ENST00000377047 NXT2Q9NPJ8 142 aaKnown RBP11.1□□□□□ -0.63
GPC6-201ENST00000377047 ZNRD1Q9P1U0 126 aa11.1□□□□□ -0.63
GPC6-201ENST00000377047 C1QTNF4Q9BXJ3 329 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 OVOL3O00110 214 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 UBE2E1P51965 193 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 CHTOPQ9Y3Y2 248 aaKnown RBP11.09□□□□□ -0.63
GPC6-201ENST00000377047 CTAG1AP78358 180 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 FOXL2NBQ6ZUU3 175 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 LHFPL1Q86WI0 220 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 RNF182Q8N6D2 247 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 HBDP02042 147 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 RLFQ13129 1914 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 IGHV1-69DA0A0B4J2H0 117 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 IGHV1-69P01742 117 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 PPBPP02775 128 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 CR1LQ2VPA4 569 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 Q8TAT8 98 aa11.09□□□□□ -0.63
GPC6-201ENST00000377047 A0A0U1RRA0 63 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
GPC6-201ENST00000377047 SERF1AO75920 110 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 TSPAN13O95857 204 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 TSKUQ8WUA8 353 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 TRBV6-6A0A0A6YYG2 114 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 RPL36AP83881 106 aaKnown RBP11.08□□□□□ -0.64
GPC6-201ENST00000377047 LCN12Q6JVE5 192 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 RPL36ALQ969Q0 106 aaKnown RBP11.08□□□□□ -0.64
GPC6-201ENST00000377047 TOMM40O96008 361 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 PARD6GQ9BYG4 376 aaPredicted RBP11.08□□□□□ -0.64
GPC6-201ENST00000377047 MYO7BQ6PIF6 2116 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 CKS1BP61024 79 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 TMEM249Q2WGJ8 235 aa11.08□□□□□ -0.64
GPC6-201ENST00000377047 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 DAZ1Q9NQZ3 744 aaKnown RBP11.07□□□□□ -0.64
GPC6-201ENST00000377047 ZNF876PQ49A33 203 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 IGKV1-16P04430 117 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 LINC00614P0C842 121 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 COL6A6A6NMZ7 2263 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 CACNA1BQ00975 2339 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 DPM2O94777 84 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 STAG3L3P0CL85 134 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 SUPT4H1P63272 117 aaKnown RBP11.07□□□□□ -0.64
GPC6-201ENST00000377047 FER1L5A0AVI2 2057 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 ATP6V0E1O15342 81 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 TNFSF13O75888 250 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 IL17RELQ6ZVW7 336 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 DTX1Q86Y01 620 aa11.07□□□□□ -0.64
GPC6-201ENST00000377047 IGHV2-70DA0A0C4DH43 119 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 LINC00158P58513 81 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 MED12Q93074 2177 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 TRAV2A0A0B4J234 112 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 NCR2O95944 276 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 DEFB130BP0DP73 79 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 DEFB130AP0DP74 79 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 FAM110DQ8TAY7 271 aaPredicted RBP11.06□□□□□ -0.64
GPC6-201ENST00000377047 PI4KAP42356 2102 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 LINC01619G3V211 115 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 SH2D1AO60880 128 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 NMSQ5H8A3 153 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 DEFB131AP59861 70 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 MBD3L1Q8WWY6 194 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 PRR31Q5SQ13 230 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 NRN1Q9NPD7 142 aa11.06□□□□□ -0.64
GPC6-201ENST00000377047 TCRAP04437 139 aa11.05□□□□□ -0.64
GPC6-201ENST00000377047 CEACAM8P31997 349 aaPredicted RBP11.05□□□□□ -0.64
GPC6-201ENST00000377047 NCOR1O75376 2440 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms