RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ELOA3CA0A087WX78 387 aaPredicted RBP8.06□□□□□ -1.12
PDPN-203ENST00000376061 IGHV3-35A0A0C4DH35 117 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 A0A1W2PPV4 95 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 ANKRD34BA5PLL1 514 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 BMPR1BO00238 502 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 EREGO14944 169 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 HBE1P02100 147 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 IL4P05112 153 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 LGALS1P09382 135 aaKnown RBP8.06□□□□□ -1.12
PDPN-203ENST00000376061 FGF8P55075 233 aaPredicted RBP8.06□□□□□ -1.12
PDPN-203ENST00000376061 FAM209BQ5JX69 171 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 FAM78BQ5VT40 261 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 C10orf113Q5VZT2 155 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 MIR17HGQ75NE6 70 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 COMMD7Q86VX2 200 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 Q8WTZ3 238 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 UBE2E2Q96LR5 201 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 UHRF2Q96PU4 802 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 RNF2Q99496 336 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 PBDC1Q9BVG4 233 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 MRPL32Q9BYC8 188 aaKnown RBP8.06□□□□□ -1.12
PDPN-203ENST00000376061 DNAJC4Q9NNZ3 241 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 MED9Q9NWA0 146 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 HIGD1AQ9Y241 93 aa8.06□□□□□ -1.12
PDPN-203ENST00000376061 PUS1Q9Y606 427 aaKnown RBP eCLIP8.06□□□□□ -1.12
PDPN-203ENST00000376061 PROK1P58294 105 aa8.05□□□□□ -1.12
PDPN-203ENST00000376061 CCL20P78556 96 aa8.05□□□□□ -1.12
PDPN-203ENST00000376061 RELQ04864 619 aaPredicted RBP8.05□□□□□ -1.12
PDPN-203ENST00000376061 ODF1Q14990 250 aa8.05□□□□□ -1.12
PDPN-203ENST00000376061 NDUFA5Q16718 116 aa8.05□□□□□ -1.12
PDPN-203ENST00000376061 TOMM20LQ6UXN7 152 aa8.05□□□□□ -1.12
PDPN-203ENST00000376061 SLC7A5P1Q8MH63 180 aa8.05□□□□□ -1.12
PDPN-203ENST00000376061 SCRT1Q9BWW7 348 aa8.05□□□□□ -1.12
PDPN-203ENST00000376061 MRPL27Q9P0M9 148 aaKnown RBP8.05□□□□□ -1.12
PDPN-203ENST00000376061 PEF1Q9UBV8 284 aaKnown RBP8.05□□□□□ -1.12
PDPN-203ENST00000376061 IGHV3OR16-8A0A075B7F1 116 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 CLPSL1A2RUU4 121 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 STAG3L2P0CL84 134 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 STAG3L3P0CL85 134 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 ARL14EPLP0DKL9 152 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 KHDC3LQ587J8 217 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 KHDC1LQ5JSQ8 128 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 IL34Q6ZMJ4 242 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 C18orf65Q6ZTR6 163 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 LINC00305Q7Z4B0 112 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 REC114Q7Z4M0 266 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 FAM167A-AS1Q96KT0 104 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 SLC25A2Q9BXI2 301 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 TECRQ9NZ01 308 aaKnown RBP8.04□□□□□ -1.12
PDPN-203ENST00000376061 RNF114Q9Y508 228 aa8.04□□□□□ -1.12
PDPN-203ENST00000376061 TRAV5A0A0B4J249 113 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 H3BRN7 92 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 I3L521 148 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 NDUFA4O00483 81 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 GGCTO75223 188 aaKnown RBP8.03□□□□□ -1.12
PDPN-203ENST00000376061 CXorf1O96002 111 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 C8orf88P0DMB2 117 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 CD28P10747 220 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 CDX1P47902 265 aaPredicted RBP8.03□□□□□ -1.12
PDPN-203ENST00000376061 TAS2R45P59539 299 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 HIST2H2BDQ6DRA6 164 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.03□□□□□ -1.12
PDPN-203ENST00000376061 C4orf3Q8WVX3 66 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 ZNF503Q96F45 646 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 SHANK2-AS3Q9BTD1 123 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 KRTAP4-8Q9BYQ9 185 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 SLC25A39Q9BZJ4 359 aaPredicted RBP8.03□□□□□ -1.12
PDPN-203ENST00000376061 JMJD1CQ15652 2540 aa8.03□□□□□ -1.12
PDPN-203ENST00000376061 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 A0A087WW49 117 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 NUDT19A8MXV4 375 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 OR7C2O60412 319 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 GCHFRP30047 84 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 DEFB136Q30KP8 78 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 LEMD1Q68G75 181 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 UNQ9165/PRO28630Q6UXU0 137 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 IQCF2Q8IXL9 164 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 C11orf44Q8N8P7 122 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 KLHL30-AS1Q8NEE0 82 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 TMEM190Q8WZ59 177 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 MARC2Q969Z3 335 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 TMPRSS5Q9H3S3 457 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 PGPEP1Q9NXJ5 209 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 GNG13Q9P2W3 67 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 RABAC1Q9UI14 185 aa8.02□□□□□ -1.13
PDPN-203ENST00000376061 RAB19A4D1S5 217 aa8.01□□□□□ -1.13
PDPN-203ENST00000376061 ZNF207O43670 478 aaKnown RBP8.01□□□□□ -1.13
PDPN-203ENST00000376061 HSPB1P04792 205 aaKnown RBP8.01□□□□□ -1.13
PDPN-203ENST00000376061 GP9P14770 177 aa8.01□□□□□ -1.13
PDPN-203ENST00000376061 UBE2L3P68036 154 aaKnown RBP8.01□□□□□ -1.13
PDPN-203ENST00000376061 TOR2AQ5JU69 321 aa8.01□□□□□ -1.13
PDPN-203ENST00000376061 PQLC2Q6ZP29 291 aa8.01□□□□□ -1.13
PDPN-203ENST00000376061 WFDC12Q8WWY7 111 aa8.01□□□□□ -1.13
PDPN-203ENST00000376061 FAM210AQ96ND0 272 aa8.01□□□□□ -1.13
PDPN-203ENST00000376061 CITED2Q99967 270 aaPredicted RBP8.01□□□□□ -1.13
PDPN-203ENST00000376061 C20orf24Q9BUV8 137 aa8.01□□□□□ -1.13
PDPN-203ENST00000376061 A0A1B0GUS0 222 aa8□□□□□ -1.13
PDPN-203ENST00000376061 LOC102723971A0A1B0GUV8 181 aa8□□□□□ -1.13
PDPN-203ENST00000376061 ZNF98A6NK75 572 aa8□□□□□ -1.13
PDPN-203ENST00000376061 OR10J4P0C629 311 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms