RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 MEF2CQ06413 473 aaPredicted RBP5.34□□□□□ -1.56
SMC1A-202ENST00000375340 LDLRAD2Q5SZI1 272 aa5.34□□□□□ -1.56
SMC1A-202ENST00000375340 RPRMLQ8N4K4 120 aa5.34□□□□□ -1.56
SMC1A-202ENST00000375340 Q8TAT8 98 aa5.34□□□□□ -1.56
SMC1A-202ENST00000375340 TMEM208Q9BTX3 173 aa5.34□□□□□ -1.56
SMC1A-202ENST00000375340 CADP27708 2225 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 CRXO43186 299 aaPredicted RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 ZNF56Q15929 161 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 CHCHD1Q96BP2 118 aaKnown RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 SLC25A39Q9BZJ4 359 aaPredicted RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 PMS2P5A8MQ11 134 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 ZNF134P52741 427 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 LURAP1LQ8IV03 231 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 ORMDL3Q8N138 153 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 C21orf62Q9NYP8 219 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 SOX21Q9Y651 276 aaPredicted RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 NBR2O15453 112 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 LGALS3P17931 250 aaKnown RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 SLC25A48Q6ZT89 311 aaKnown RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 PSG8Q9UQ74 426 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 LYRM7Q5U5X0 104 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 PLSCR4Q9NRQ2 329 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 KLF2Q9Y5W3 355 aaPredicted RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 RNASE2P10153 161 aaKnown RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 SH2D1AO60880 128 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 TYMSP04818 313 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 ATP5IP56385 69 aaPredicted RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 SLAQ13239 276 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 KLF17Q5JT82 389 aaPredicted RBP5.33□□□□□ -1.56
SMC1A-202ENST00000375340 SSC4DQ8WTU2 575 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 IGFBPL1Q8WX77 278 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 IGHV3OR16-12A0A075B7B8 117 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 SRD5A1P18405 259 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 TSPOP30536 169 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 KRTAP27-1Q3LI81 207 aa5.33□□□□□ -1.56
SMC1A-202ENST00000375340 PSG1P11464 419 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 FAM169BQ8N8A8 192 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 LYZL1Q6UWQ5 148 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 COLCA1Q6ZS62 124 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 LYPD6Q86Y78 171 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 MBNL3Q9NUK0 354 aaKnown RBP5.32□□□□□ -1.56
SMC1A-202ENST00000375340 V9GYV3 84 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 TRGV3P03979 118 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 C17orf58Q2M2W7 97 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 SCGB3A1Q96QR1 104 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 IGHV1-8P0DP01 117 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 IFI27P40305 119 aaPredicted RBP5.32□□□□□ -1.56
SMC1A-202ENST00000375340 PRSS57Q6UWY2 283 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 CCL19Q99731 98 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 ABCA4P78363 2273 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 TMEM14BQ9NUH8 114 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 JKAMPQ9P055 326 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 IGHV1-3A0A0C4DH29 117 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 NPPCP23582 126 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 TPSG1Q9NRR2 321 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 A0A0G2JNJ9 132 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 IGHV3-11P01762 117 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 MPV17L2Q567V2 206 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 Q9UFV3 132 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 ATP5L2Q7Z4Y8 100 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 VMO1Q7Z5L0 202 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 GTSCR1Q86UQ5 136 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 BEND2Q8NDZ0 799 aa5.32□□□□□ -1.56
SMC1A-202ENST00000375340 C15orf65H3BRN8 121 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 TMEM178BH3BS89 294 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 TCRAP04437 139 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 DIAPH2-AS1Q14236 149 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 SAPCD1Q5SSQ6 148 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 DPF1Q92782 380 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 ZNF257Q9Y2Q1 563 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 GGTLC3B5MD39 225 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 SYT8Q8NBV8 401 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 NHP2Q9NX24 153 aaKnown RBP5.31□□□□□ -1.56
SMC1A-202ENST00000375340 NPIPB5A8MRT5 1133 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 NUPR1O60356 82 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 ERCC8Q13216 396 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 ZNF474Q6S9Z5 364 aaPredicted RBP5.31□□□□□ -1.56
SMC1A-202ENST00000375340 LCNL1Q6ZST4 164 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 Q86TA4 180 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 C5orf30Q96GV9 206 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 PIMREGQ9BSJ6 248 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 RAXQ9Y2V3 346 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 SYS1-DBNDD2H3BUS1 97 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 GUSBP1Q15486 140 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 DYNLRB2Q8TF09 96 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 CPAMD8Q8IZJ3 1885 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 SMIM27A0A1W2PRY6 76 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 IGLV2-14P01704 120 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 Q6ZVH6 145 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 TMEM238LA0A1B0GVL6 79 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 A6NJY4 79 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 DPM3Q9P2X0 92 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 ASIPP42127 132 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 LINC00527Q9UJ94 153 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 EML5Q05BV3 1969 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 LY6HO94772 140 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 HBDP02042 147 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 PDLIM4P50479 330 aa5.31□□□□□ -1.56
SMC1A-202ENST00000375340 EBLN2Q6P2I7 272 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms