RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 LIME1Q9H400 295 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 C22orf46C9J442 243 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 GPHA2Q96T91 129 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 H3BMM0 161 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 IFITM1P13164 125 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 C2orf82Q6UX34 121 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 HLA-DMBP28068 263 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 GCSAMLQ5JQS6 135 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 Q86TA4 180 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 C17orf82Q86X59 251 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-204ENST00000375290 ZCCHC24Q8N2G6 241 aaKnown RBP8.39□□□□□ -1.07
PTCH1-204ENST00000375290 FAM90A27PA6NNH2 459 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 TFPI2P48307 235 aa8.39□□□□□ -1.07
PTCH1-204ENST00000375290 MRPL20Q9BYC9 149 aaKnown RBP8.38□□□□□ -1.07
PTCH1-204ENST00000375290 FAM223BA6NKX1 122 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 PF4V1P10720 104 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 PSG1P11464 419 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 COLCA1Q6ZS62 124 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 FAM223AQ8IWN6 122 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 USMG5Q96IX5 58 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 VWC2Q2TAL6 325 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 Q8NFD4 153 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 ST6GALNAC6Q969X2 333 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 IGHG4P01861 327 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 ATP5G1P05496 136 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 IGKV1D-8A0A087WSZ0 117 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 TGFBR3LH3BV60 316 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 M0R1W7 72 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 SIGLEC15Q6ZMC9 328 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 FANCMQ8IYD8 2048 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 IGHV3-21A0A0B4J1V1 117 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 A6NNC1 897 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 LEPROTO15243 131 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 C8orf31Q8N9H6 132 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 PHLDA1Q8WV24 401 aaPredicted RBP8.38□□□□□ -1.07
PTCH1-204ENST00000375290 UBE2WQ96B02 151 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 COL4A5P29400 1685 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 FOXF2Q12947 444 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 TRAV8-1A0A0A6YYK1 113 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 C15orf62A8K5M9 175 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 ZNF329Q86UD4 541 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 VSIRQ9H7M9 311 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 KIAA2026Q5HYC2 2103 aa8.38□□□□□ -1.07
PTCH1-204ENST00000375290 PRR19A6NJB7 356 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 CFAP161Q6P656 301 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 CRIPAKQ8N1N5 446 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 PI4KAP42356 2102 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 FAM104BQ5XKR9 115 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 LENEPQ9Y5L5 61 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 V9GYV3 84 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 TRGV3P03979 118 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 GATA4P43694 442 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 DEFB125Q8N687 156 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 IGKV1D-33P01593 117 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 IGKV1-33P01594 117 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 ADAMTSL5Q6ZMM2 481 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 LY6G5BQ8NDX9 201 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 IGKV1-12A0A0C4DH73 117 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 IGKV1D-12P01611 117 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 ST6GALNAC3Q8NDV1 305 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 AKAP6Q13023 2319 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 Q8N8P6 123 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 DMRTA2Q96SC8 542 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 PGPEP1Q9NXJ5 209 aa8.37□□□□□ -1.07
PTCH1-204ENST00000375290 RASL10AQ92737 203 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 RHODO00212 210 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 VDAC2P45880 294 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-204ENST00000375290 GTSF1LQ9H1H1 148 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 ZNF319Q9P2F9 582 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 TNFRSF6BO95407 300 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 TET1Q8NFU7 2136 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 MGAMO43451 1857 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 DUX5Q96PT3 197 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 TANC1Q9C0D5 1861 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 SNAI2O43623 268 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 DEFB123Q8N688 67 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 FBXL15Q9H469 300 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 TMEM126AQ9H061 195 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 CD55P08174 381 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 PEAR1Q5VY43 1037 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-204ENST00000375290 DEPPQ9NTK1 212 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 APELAP0DMC3 54 aa8.36□□□□□ -1.07
PTCH1-204ENST00000375290 IGKV1-27A0A075B6S5 117 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 AMN1Q8IY45 258 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 RSPO3Q9BXY4 272 aaPredicted RBP8.35□□□□□ -1.07
PTCH1-204ENST00000375290 PYYP10082 97 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 IGHV1-2P23083 117 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 LHFPL4Q7Z7J7 247 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 VGLL1Q99990 258 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 CD28P10747 220 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 FHL1Q13642 323 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 ANAPC1Q9H1A4 1944 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 SHANK2-AS3Q9BTD1 123 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 A0A087X0K7 114 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 ZNHIT1O43257 154 aa8.35□□□□□ -1.07
PTCH1-204ENST00000375290 TMEM95Q3KNT9 176 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms