RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 GRNP28799 593 aaKnown RBP5.22□□□□□ -1.57
PTPN3-202ENST00000374541 ADMP35318 185 aa5.22□□□□□ -1.57
PTPN3-202ENST00000374541 ATP5G3P48201 142 aa5.22□□□□□ -1.57
PTPN3-202ENST00000374541 ZP1P60852 638 aa5.22□□□□□ -1.57
PTPN3-202ENST00000374541 STHQ8IWL8 128 aa5.22□□□□□ -1.57
PTPN3-202ENST00000374541 LINC01587Q99440 93 aa5.22□□□□□ -1.57
PTPN3-202ENST00000374541 MBD3L4A6NDZ8 208 aaPredicted RBP5.21□□□□□ -1.57
PTPN3-202ENST00000374541 MBD3L3A6NE82 208 aaPredicted RBP5.21□□□□□ -1.57
PTPN3-202ENST00000374541 MBD3L5A6NJ08 208 aaPredicted RBP5.21□□□□□ -1.57
PTPN3-202ENST00000374541 DLEU1O43261 78 aa5.21□□□□□ -1.57
PTPN3-202ENST00000374541 C1orf194Q5T5A4 169 aa5.21□□□□□ -1.57
PTPN3-202ENST00000374541 MBD3L2Q8NHZ7 208 aaPredicted RBP5.21□□□□□ -1.57
PTPN3-202ENST00000374541 SEPSECSQ9HD40 501 aaKnown RBP5.21□□□□□ -1.57
PTPN3-202ENST00000374541 TRAV2A0A0B4J234 112 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 TRAV1-1A0A0B4J248 108 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 H3BTX0 84 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 TFF3Q07654 80 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 TMEM167AQ8TBQ9 72 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 CHD8Q9HCK8 2581 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 CENPVL1A0A0U1RR11 272 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 SNAI2O43623 268 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 EFEMP2O95967 443 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 REG1AP05451 166 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 INAFM2P0DMQ5 153 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 PTPRSQ13332 1948 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 TANC1Q9C0D5 1861 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIVEP2P31629 2446 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BKO60814 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BJP06899 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 ESDP10768 282 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BOP23527 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BBP33778 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BDP58876 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BCP62807 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST2H2BEQ16778 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 KLF17Q5JT82 389 aaPredicted RBP5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.21□□□□□ -1.58
PTPN3-202ENST00000374541 ASCL4Q6XD76 172 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 MIR17HGQ75NE6 70 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 NEGR1Q7Z3B1 354 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 TNFRSF14Q92956 283 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BHQ93079 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BNQ99877 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BMQ99879 126 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 FOXA2Q9Y261 457 aaPredicted RBP5.21□□□□□ -1.58
PTPN3-202ENST00000374541 MRPS18CQ9Y3D5 142 aaKnown RBP5.21□□□□□ -1.58
PTPN3-202ENST00000374541 ZFC3H1O60293 1989 aaKnown RBP5.21□□□□□ -1.58
PTPN3-202ENST00000374541 DOPEY2Q9Y3R5 2298 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 RALGAPA2Q2PPJ7 1873 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 IGLV3-12A0A075B6K2 115 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 TDGF1P3P51864 188 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 LAGE3Q14657 143 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 TEX38Q6PEX7 206 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 FAM19A2Q8N3H0 131 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 SLX1AQ9BQ83 275 aa5.21□□□□□ -1.58
PTPN3-202ENST00000374541 MRPL20Q9BYC9 149 aaKnown RBP5.21□□□□□ -1.58
PTPN3-202ENST00000374541 C15orf61A6NNL5 157 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 TNFRSF6BO95407 300 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 CTHRC1Q96CG8 243 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 JPT2Q9H910 190 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 MRPL27Q9P0M9 148 aaKnown RBP5.2□□□□□ -1.58
PTPN3-202ENST00000374541 IGKV1D-42A0A075B6H8 117 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 TRBV6-7A0A0A0MS04 114 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 TRAV12-3A0A0B4J271 114 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 HEPN1Q6WQI6 88 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 PLSCR4Q9NRQ2 329 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 PSG8Q9UQ74 426 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 NLRC5Q86WI3 1866 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 MSGN1A6NI15 193 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 YPEL1O60688 119 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 EGR1P18146 543 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 RNASE4P34096 147 aaKnown RBP5.2□□□□□ -1.58
PTPN3-202ENST00000374541 RNF125Q96EQ8 232 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 YPEL2Q96QA6 119 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 DMRTA2Q96SC8 542 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 HIST1H2BLQ99880 126 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 RTBDNQ9BSG5 229 aaPredicted RBP5.2□□□□□ -1.58
PTPN3-202ENST00000374541 CST9LQ9H4G1 147 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 PCM1Q15154 2024 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 IGHV3-11P01762 117 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 LHFPL4Q7Z7J7 247 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 HIST3H2BBQ8N257 126 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 SLC25A39Q9BZJ4 359 aaPredicted RBP5.2□□□□□ -1.58
PTPN3-202ENST00000374541 TRAV5A0A0B4J249 113 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 NBR2O15453 112 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 KLF4O43474 513 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 PMVKQ15126 192 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 RPL39P5Q59GN2 51 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 Q5BKY6 102 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 C2orf82Q6UX34 121 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 KLK5Q9Y337 293 aaPredicted RBP5.2□□□□□ -1.58
PTPN3-202ENST00000374541 ATG2AQ2TAZ0 1938 aa5.2□□□□□ -1.58
PTPN3-202ENST00000374541 PRR32B1ATL7 298 aa5.19□□□□□ -1.58
PTPN3-202ENST00000374541 LDLRAD4O15165 306 aa5.19□□□□□ -1.58
PTPN3-202ENST00000374541 VGLL1Q99990 258 aa5.19□□□□□ -1.58
PTPN3-202ENST00000374541 C1QTNF5Q9BXJ0 243 aa5.19□□□□□ -1.58
PTPN3-202ENST00000374541 RPRMLQ8N4K4 120 aa5.19□□□□□ -1.58
PTPN3-202ENST00000374541 WFDC11Q8NEX6 87 aa5.19□□□□□ -1.58
PTPN3-202ENST00000374541 WDR83OSQ9Y284 106 aa5.19□□□□□ -1.58
PTPN3-202ENST00000374541 KLF12Q9Y4X4 402 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms