RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 COA6Q5JTJ3 125 aaKnown RBP9.8□□□□□ -0.84
PRPF4-202ENST00000374199 ACTL10Q5JWF8 245 aa9.8□□□□□ -0.84
PRPF4-202ENST00000374199 C16orf54Q6UWD8 224 aa9.8□□□□□ -0.84
PRPF4-202ENST00000374199 RNF125Q96EQ8 232 aa9.8□□□□□ -0.84
PRPF4-202ENST00000374199 PRDM13Q9H4Q3 707 aa9.8□□□□□ -0.84
PRPF4-202ENST00000374199 ZNF586Q9NXT0 402 aa9.8□□□□□ -0.84
PRPF4-202ENST00000374199 THYN1Q9P016 225 aa9.8□□□□□ -0.84
PRPF4-202ENST00000374199 H3BUA1 57 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 PEX7O00628 323 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 AVPP01185 164 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 S100A9P06702 114 aaKnown RBP9.79□□□□□ -0.84
PRPF4-202ENST00000374199 ADMP35318 185 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 ZNF600Q6ZNG1 722 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 ZFAND3Q9H8U3 227 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 C21orf62Q9NYP8 219 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 AKAP9Q99996 3911 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 IGLV2-11P01706 119 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H1EP10412 219 aaKnown RBP9.79□□□□□ -0.84
PRPF4-202ENST00000374199 USF2Q15853 346 aaPredicted RBP9.79□□□□□ -0.84
PRPF4-202ENST00000374199 CLEC12BQ2HXU8 276 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 OR10G8Q8NGN5 311 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 BTF3L4Q96K17 158 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 OTORQ9NRC9 128 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 EPDR1Q9UM22 224 aa9.79□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H2BKO60814 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 LTAP01374 205 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H2BJP06899 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 NBEAP1P0C6P0 100 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 ORM2P19652 201 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H2BOP23527 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H2BBP33778 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 FAM3BP58499 235 aaPredicted RBP9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H2BDP58876 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H2BCP62807 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 PDE6HQ13956 83 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST2H2BEQ16778 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.78□□□□□ -0.84
PRPF4-202ENST00000374199 COX8CQ7Z4L0 72 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 LINC01356Q8N9X3 169 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H2BHQ93079 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H2BNQ99877 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 HIST1H2BMQ99879 126 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 RNF24Q9Y225 148 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 TRBV19A0A075B6N1 114 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 IGHV3-21A0A0B4J1V1 117 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 TRAV40A0A0B4J280 105 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 ZNF253O75346 499 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 IGHG2P01859 326 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 PPIFP30405 207 aaKnown RBP9.78□□□□□ -0.84
PRPF4-202ENST00000374199 SUMO1P63165 101 aaKnown RBP9.78□□□□□ -0.84
PRPF4-202ENST00000374199 PRSS57Q6UWY2 283 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 IL36BQ9NZH7 164 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 ZNF320A2RRD8 509 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 LINC01548A6NM66 108 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 NECAP1Q8NC96 275 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 NRGNQ92686 78 aa9.78□□□□□ -0.84
PRPF4-202ENST00000374199 GNG4P50150 75 aa9.77□□□□□ -0.84
PRPF4-202ENST00000374199 SIGLEC15Q6ZMC9 328 aa9.77□□□□□ -0.84
PRPF4-202ENST00000374199 C5orf17Q8NAS9 161 aa9.77□□□□□ -0.84
PRPF4-202ENST00000374199 ATG101Q9BSB4 218 aa9.77□□□□□ -0.84
PRPF4-202ENST00000374199 TPRP12270 2363 aaKnown RBP9.77□□□□□ -0.85
PRPF4-202ENST00000374199 ZNF469Q96JG9 3925 aaPredicted RBP9.77□□□□□ -0.85
PRPF4-202ENST00000374199 SMIM27A0A1W2PRY6 76 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 AP4M1O00189 453 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 URGCP-MRPS24S4R325 110 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 U3KQE9 123 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 A0A087X0K7 114 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 CLPSL1A2RUU4 121 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 FAM223BA6NKX1 122 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 M0QZK8 103 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 HOXA5P20719 270 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 S100A12P80511 92 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 FAM223AQ8IWN6 122 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 FMC1Q96HJ9 113 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 PRSS22Q9GZN4 317 aa9.77□□□□□ -0.85
PRPF4-202ENST00000374199 PRRC2AP48634 2157 aaKnown RBP9.76□□□□□ -0.85
PRPF4-202ENST00000374199 TENM4Q6N022 2769 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 TRBV7-1A0A0A6YYK4 115 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 IFITM10A6NMD0 228 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 FBXL7Q9UJT9 491 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 IGLV1-40P01703 118 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 TRGC2P03986 189 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 FAM209BQ5JX69 171 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 BCL6BQ8N143 479 aaPredicted RBP9.76□□□□□ -0.85
PRPF4-202ENST00000374199 PSMG3-AS1Q96PY0 264 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 Q9H3A6 140 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 NIT2Q9NQR4 276 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 HIF1ANQ9NWT6 349 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 ZNF492Q9P255 531 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 ZNF462Q96JM2 2506 aa9.76□□□□□ -0.85
PRPF4-202ENST00000374199 C19orf71A6NCJ1 209 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 NPIPB6E9PJ23 425 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 TCRAP04437 139 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 S100PP25815 95 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 RPS10P46783 165 aaKnown RBP9.75□□□□□ -0.85
PRPF4-202ENST00000374199 KRTAP10-9P60411 292 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 LYZP61626 148 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 KCNIP4Q6PIL6 250 aa9.75□□□□□ -0.85
PRPF4-202ENST00000374199 FRZBQ92765 325 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms