RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 WDR73Q6P4I2 378 aa14.78□□□□□ -0.04
USP49-202ENST00000373010 KIR3DL3Q8N743 410 aa14.78□□□□□ -0.04
USP49-202ENST00000373010 ATG101Q9BSB4 218 aa14.78□□□□□ -0.04
USP49-202ENST00000373010 AMY1AP04745 511 aa14.78□□□□□ -0.04
USP49-202ENST00000373010 SFTPCP11686 197 aa14.78□□□□□ -0.04
USP49-202ENST00000373010 RPL19P84098 196 aaKnown RBP14.78□□□□□ -0.04
USP49-202ENST00000373010 UNQ6494/PRO21346Q6UXR6 183 aa14.78□□□□□ -0.04
USP49-202ENST00000373010 SIRPDQ9H106 197 aa14.78□□□□□ -0.04
USP49-202ENST00000373010 TOX4O94842 621 aa14.77□□□□□ -0.04
USP49-202ENST00000373010 TCRAP04437 139 aa14.77□□□□□ -0.04
USP49-202ENST00000373010 PKIAP61925 76 aa14.77□□□□□ -0.04
USP49-202ENST00000373010 CCDC144NLQ6NUI1 221 aa14.77□□□□□ -0.04
USP49-202ENST00000373010 GRAMD2BQ96HH9 432 aa14.77□□□□□ -0.04
USP49-202ENST00000373010 FAM209BQ5JX69 171 aa14.77□□□□□ -0.05
USP49-202ENST00000373010 EXOC3-AS1Q8N2X6 119 aa14.77□□□□□ -0.05
USP49-202ENST00000373010 Q8N6K4 173 aa14.77□□□□□ -0.05
USP49-202ENST00000373010 ARPC1AQ92747 370 aa14.77□□□□□ -0.05
USP49-202ENST00000373010 GPR82Q96P67 336 aa14.77□□□□□ -0.05
USP49-202ENST00000373010 FANCD2OSQ96PS1 177 aa14.77□□□□□ -0.05
USP49-202ENST00000373010 TMEM14CQ9P0S9 112 aa14.77□□□□□ -0.05
USP49-202ENST00000373010 MT-ND6P03923 174 aa14.76□□□□□ -0.05
USP49-202ENST00000373010 ZNF562Q6V9R5 426 aa14.76□□□□□ -0.05
USP49-202ENST00000373010 BAGE3Q86Y29 109 aa14.76□□□□□ -0.05
USP49-202ENST00000373010 HIST1H1EP10412 219 aaKnown RBP14.76□□□□□ -0.05
USP49-202ENST00000373010 EFNA4P52798 201 aa14.76□□□□□ -0.05
USP49-202ENST00000373010 LINC00322Q6ZN03 302 aaPredicted RBP14.76□□□□□ -0.05
USP49-202ENST00000373010 GNB4Q9HAV0 340 aa14.76□□□□□ -0.05
USP49-202ENST00000373010 TOMM40O96008 361 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 IL4P05112 153 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 ZNF491Q8N8L2 437 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 NUP35Q8NFH5 326 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 C17orf77Q96MU5 243 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 MS4A10Q96PG2 267 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 SHANK2-AS3Q9BTD1 123 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 MLST8Q9BVC4 326 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 IGLV11-55A0A075B6I3 123 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 PRB4P10163 310 aaPredicted RBP14.75□□□□□ -0.05
USP49-202ENST00000373010 TMEM11P17152 192 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 Q0VG73 95 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 USF2Q15853 346 aaPredicted RBP14.75□□□□□ -0.05
USP49-202ENST00000373010 MINOS1Q5TGZ0 78 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 BCL6BQ8N143 479 aaPredicted RBP14.75□□□□□ -0.05
USP49-202ENST00000373010 FMC1Q96HJ9 113 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 TMEM68Q96MH6 324 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 OTORQ9NRC9 128 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 MINOS1-NBL1R4GNA1 71 aa14.75□□□□□ -0.05
USP49-202ENST00000373010 TRAV8-1A0A0A6YYK1 113 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 NPIPB5A8MRT5 1133 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 OOSP1A8MZH6 123 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 TSTD3H0UI37 97 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 H3BRN7 92 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 LTAP01374 205 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 CD33P20138 364 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 COX19Q49B96 90 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 FAM120AOSQ5T036 256 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 ZNF664Q8N3J9 261 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 RNF125Q96EQ8 232 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 ZNF331Q9NQX6 463 aaPredicted RBP14.74□□□□□ -0.05
USP49-202ENST00000373010 IGHV2-70DA0A0C4DH43 119 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 BMPR1BO00238 502 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 GNG7O60262 68 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 SCGB1D1O95968 90 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 EBI3Q14213 229 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 Q71RC1 249 aaPredicted RBP14.74□□□□□ -0.05
USP49-202ENST00000373010 NEU1Q99519 415 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 BPESC1Q9GZL8 116 aa14.74□□□□□ -0.05
USP49-202ENST00000373010 IGHV3-23P01764 117 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 HLA-DQA1P01909 254 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 TBX15Q96SF7 602 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 ESDP10768 282 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 DDTP30046 118 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 TPPP2P59282 170 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 GDF5OSQ5U4N7 250 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 GOLT1AQ6ZVE7 132 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 TTC9CQ8N5M4 171 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 TSKUQ8WUA8 353 aa14.73□□□□□ -0.05
USP49-202ENST00000373010 HIGD1CA8MV81 97 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 F8W735 103 aaPredicted RBP14.72□□□□□ -0.05
USP49-202ENST00000373010 SRIP30626 198 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 FCGR2BP31994 310 aaPredicted RBP14.72□□□□□ -0.05
USP49-202ENST00000373010 LMO4P61968 165 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 DEFA6Q01524 100 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 WI2-2373I1.2A0A1W2PRP0 233 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 VWC2LB2RUY7 222 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 NDUFB8O95169 186 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 APCSP02743 223 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 EGR2P11161 476 aaPredicted RBP14.72□□□□□ -0.05
USP49-202ENST00000373010 MFAP4P55083 255 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 SLAQ13239 276 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 Q6ZWC4 215 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 BPIFA4PQ86YQ2 179 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 SMIM12Q96EX1 92 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 AJUBAQ96IF1 538 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 CHRDL1Q9BU40 450 aa14.72□□□□□ -0.05
USP49-202ENST00000373010 TRBV19A0A075B6N1 114 aa14.71□□□□□ -0.05
USP49-202ENST00000373010 IQCJQ1A5X6 159 aa14.71□□□□□ -0.05
USP49-202ENST00000373010 Q56UQ5 140 aa14.71□□□□□ -0.05
USP49-202ENST00000373010 TCF24Q7RTU0 167 aa14.71□□□□□ -0.05
USP49-202ENST00000373010 Q86TA4 180 aa14.71□□□□□ -0.05
USP49-202ENST00000373010 IGHV7-81A0A0B4J1V7 117 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms