RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 NTN3O00634 580 aaPredicted RBP19.63■□□□□ 0.73
RAPGEF1-203ENST00000372195 OR2K2Q8NGT1 345 aa19.63■□□□□ 0.73
RAPGEF1-203ENST00000372195 A0A0G2JRQ6 117 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 FAM90A9PA6NNJ1 464 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 ATP5L2Q7Z4Y8 100 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 WNT2P09544 360 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 TRAV8-1A0A0A6YYK1 113 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 ADARB2-AS1A8MUL3 147 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 LY6HO94772 140 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 C20orf204Q6ZNR8 217 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 NUP35Q8NFH5 326 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 SH2D1AO60880 128 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 SLC25A15Q9Y619 301 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 TMEM249Q2WGJ8 235 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 NMSQ5H8A3 153 aa19.62■□□□□ 0.73
RAPGEF1-203ENST00000372195 GAGE13Q4V321 117 aa19.61■□□□□ 0.73
RAPGEF1-203ENST00000372195 ERVK11-1P61568 191 aa19.61■□□□□ 0.73
RAPGEF1-203ENST00000372195 GUSBP1Q15486 140 aa19.61■□□□□ 0.73
RAPGEF1-203ENST00000372195 ORMDL2Q53FV1 153 aa19.61■□□□□ 0.73
RAPGEF1-203ENST00000372195 E9PLN8 166 aa19.61■□□□□ 0.73
RAPGEF1-203ENST00000372195 SRRM5B3KS81 715 aa19.6■□□□□ 0.73
RAPGEF1-203ENST00000372195 LCNL1Q6ZST4 164 aa19.6■□□□□ 0.73
RAPGEF1-203ENST00000372195 CHCHD5Q9BSY4 110 aa19.6■□□□□ 0.73
RAPGEF1-203ENST00000372195 LINC00158P58513 81 aa19.6■□□□□ 0.73
RAPGEF1-203ENST00000372195 HSD52Q0P140 79 aa19.6■□□□□ 0.73
RAPGEF1-203ENST00000372195 PYY3Q5JQD4 70 aa19.6■□□□□ 0.73
RAPGEF1-203ENST00000372195 TRBV24-1A0A075B6N3 115 aa19.6■□□□□ 0.73
RAPGEF1-203ENST00000372195 KIF26BQ2KJY2 2108 aa19.6■□□□□ 0.73
RAPGEF1-203ENST00000372195 TMEM178BH3BS89 294 aa19.6■□□□□ 0.73
RAPGEF1-203ENST00000372195 LYPD2Q6UXB3 125 aa19.59■□□□□ 0.73
RAPGEF1-203ENST00000372195 ADCYAP1P18509 176 aa19.59■□□□□ 0.73
RAPGEF1-203ENST00000372195 TMEM242Q9NWH2 141 aa19.59■□□□□ 0.73
RAPGEF1-203ENST00000372195 TPTE2P1Q5T6R2 138 aa19.59■□□□□ 0.73
RAPGEF1-203ENST00000372195 H0YJW9 148 aa19.59■□□□□ 0.73
RAPGEF1-203ENST00000372195 A8MWV9 139 aa19.59■□□□□ 0.73
RAPGEF1-203ENST00000372195 DUSP14O95147 198 aaKnown RBP19.59■□□□□ 0.73
RAPGEF1-203ENST00000372195 GAFA1Q96PS6 74 aa19.59■□□□□ 0.73
RAPGEF1-203ENST00000372195 ERCC8Q13216 396 aa19.58■□□□□ 0.73
RAPGEF1-203ENST00000372195 Q6P435 159 aa19.58■□□□□ 0.73
RAPGEF1-203ENST00000372195 PLSCR4Q9NRQ2 329 aa19.58■□□□□ 0.73
RAPGEF1-203ENST00000372195 FREM3P0C091 2139 aa19.58■□□□□ 0.73
RAPGEF1-203ENST00000372195 F2Z2F3 143 aa19.58■□□□□ 0.72
RAPGEF1-203ENST00000372195 QRFPP83859 136 aa19.58■□□□□ 0.72
RAPGEF1-203ENST00000372195 COL4A6Q14031 1691 aa19.58■□□□□ 0.72
RAPGEF1-203ENST00000372195 SRSF7Q16629 238 aaKnown RBP eCLIP19.58■□□□□ 0.72
RAPGEF1-203ENST00000372195 BCL6BQ8N143 479 aaPredicted RBP19.58■□□□□ 0.72
RAPGEF1-203ENST00000372195 HS3ST6Q96QI5 342 aa19.58■□□□□ 0.72
RAPGEF1-203ENST00000372195 ICE1Q9Y2F5 2266 aa19.57■□□□□ 0.72
RAPGEF1-203ENST00000372195 C1orf194Q5T5A4 169 aa19.57■□□□□ 0.72
RAPGEF1-203ENST00000372195 RCHY1Q96PM5 261 aa19.57■□□□□ 0.72
RAPGEF1-203ENST00000372195 LINC00479Q96M42 142 aa19.57■□□□□ 0.72
RAPGEF1-203ENST00000372195 TRGV11A0A075B6L2 103 aa19.57■□□□□ 0.72
RAPGEF1-203ENST00000372195 FCN3O75636 299 aa19.57■□□□□ 0.72
RAPGEF1-203ENST00000372195 RPL35AP18077 110 aaKnown RBP19.57■□□□□ 0.72
RAPGEF1-203ENST00000372195 A0A0G2JNJ9 132 aa19.56■□□□□ 0.72
RAPGEF1-203ENST00000372195 Q9UFV3 132 aa19.56■□□□□ 0.72
RAPGEF1-203ENST00000372195 OVOL1O14753 267 aa19.56■□□□□ 0.72
RAPGEF1-203ENST00000372195 ZNF688P0C7X2 276 aa19.56■□□□□ 0.72
RAPGEF1-203ENST00000372195 M0R2P5 195 aa19.56■□□□□ 0.72
RAPGEF1-203ENST00000372195 C3orf79P0CE67 100 aa19.56■□□□□ 0.72
RAPGEF1-203ENST00000372195 SLC25A48Q6ZT89 311 aaKnown RBP19.56■□□□□ 0.72
RAPGEF1-203ENST00000372195 SLC25A20O43772 301 aa19.55■□□□□ 0.72
RAPGEF1-203ENST00000372195 SAP30O75446 220 aa19.55■□□□□ 0.72
RAPGEF1-203ENST00000372195 MPV17L2Q567V2 206 aa19.55■□□□□ 0.72
RAPGEF1-203ENST00000372195 PPBPP02775 128 aa19.55■□□□□ 0.72
RAPGEF1-203ENST00000372195 ZNF876PQ49A33 203 aa19.55■□□□□ 0.72
RAPGEF1-203ENST00000372195 IGKV1D-17A0A075B6S4 117 aa19.55■□□□□ 0.72
RAPGEF1-203ENST00000372195 DLEU1O43261 78 aa19.55■□□□□ 0.72
RAPGEF1-203ENST00000372195 TMEM14EPQ6UXP3 125 aa19.54■□□□□ 0.72
RAPGEF1-203ENST00000372195 ZNF329Q86UD4 541 aa19.54■□□□□ 0.72
RAPGEF1-203ENST00000372195 ERG28Q9UKR5 140 aa19.54■□□□□ 0.72
RAPGEF1-203ENST00000372195 SLC25A2Q9BXI2 301 aa19.54■□□□□ 0.72
RAPGEF1-203ENST00000372195 A0A1B0GUS0 222 aa19.54■□□□□ 0.72
RAPGEF1-203ENST00000372195 SRRM4A7MD48 611 aaKnown RBP19.54■□□□□ 0.72
RAPGEF1-203ENST00000372195 ZNF664Q8N3J9 261 aa19.54■□□□□ 0.72
RAPGEF1-203ENST00000372195 COL8A2P25067 703 aa19.54■□□□□ 0.72
RAPGEF1-203ENST00000372195 GATD1Q8NB37 220 aa19.54■□□□□ 0.72
RAPGEF1-203ENST00000372195 Q6ZRM9 215 aa19.53■□□□□ 0.72
RAPGEF1-203ENST00000372195 OR9G4Q8NGQ1 327 aa19.53■□□□□ 0.72
RAPGEF1-203ENST00000372195 A0A1B0GWJ7 208 aa19.53■□□□□ 0.72
RAPGEF1-203ENST00000372195 SEC11AP67812 179 aa19.53■□□□□ 0.72
RAPGEF1-203ENST00000372195 C14orf178Q8N769 122 aaPredicted RBP19.53■□□□□ 0.72
RAPGEF1-203ENST00000372195 CRPP02741 224 aa19.53■□□□□ 0.72
RAPGEF1-203ENST00000372195 TDGF1P3P51864 188 aa19.53■□□□□ 0.72
RAPGEF1-203ENST00000372195 ESPL1Q14674 2120 aa19.53■□□□□ 0.72
RAPGEF1-203ENST00000372195 C15orf62A8K5M9 175 aa19.52■□□□□ 0.72
RAPGEF1-203ENST00000372195 PLNP26678 52 aa19.52■□□□□ 0.72
RAPGEF1-203ENST00000372195 A0A087WWL8 130 aa19.52■□□□□ 0.72
RAPGEF1-203ENST00000372195 BUB1B-PAK6H3BSN5 160 aa19.52■□□□□ 0.72
RAPGEF1-203ENST00000372195 PSG3Q16557 428 aa19.52■□□□□ 0.72
RAPGEF1-203ENST00000372195 FAM166AQ6J272 317 aa19.52■□□□□ 0.72
RAPGEF1-203ENST00000372195 MS4A6AQ9H2W1 248 aa19.52■□□□□ 0.72
RAPGEF1-203ENST00000372195 A0A1B0GW64 132 aa19.51■□□□□ 0.71
RAPGEF1-203ENST00000372195 UBE2E2Q96LR5 201 aa19.51■□□□□ 0.71
RAPGEF1-203ENST00000372195 GTSF1LQ9H1H1 148 aa19.51■□□□□ 0.71
RAPGEF1-203ENST00000372195 IGKV1-16P04430 117 aa19.51■□□□□ 0.71
RAPGEF1-203ENST00000372195 THADAQ6YHU6 1953 aa19.51■□□□□ 0.71
RAPGEF1-203ENST00000372195 H3BUX3 64 aa19.51■□□□□ 0.71
RAPGEF1-203ENST00000372195 TRGV9Q99603 122 aa19.51■□□□□ 0.71
RAPGEF1-203ENST00000372195 DOCK6Q96HP0 2047 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms