RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 KIR3DL3Q8N743 410 aa16.28■□□□□ 0.2
VEGFA-204ENST00000372064 C14orf144Q96I85 54 aa16.28■□□□□ 0.2
VEGFA-204ENST00000372064 GPR82Q96P67 336 aa16.28■□□□□ 0.2
VEGFA-204ENST00000372064 TOMM40O96008 361 aa16.28■□□□□ 0.2
VEGFA-204ENST00000372064 MRPL54Q6P161 138 aaKnown RBP16.28■□□□□ 0.2
VEGFA-204ENST00000372064 FMC1Q96HJ9 113 aa16.28■□□□□ 0.2
VEGFA-204ENST00000372064 NOL4LQ96MY1 436 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-204ENST00000372064 F2Z2F3 143 aa16.27■□□□□ 0.2
VEGFA-204ENST00000372064 OR10J3Q5JRS4 329 aa16.27■□□□□ 0.2
VEGFA-204ENST00000372064 VMO1Q7Z5L0 202 aa16.27■□□□□ 0.2
VEGFA-204ENST00000372064 DYNAPQ8N1N2 210 aa16.27■□□□□ 0.2
VEGFA-204ENST00000372064 SGK494Q96LW2 274 aa16.27■□□□□ 0.2
VEGFA-204ENST00000372064 PRORYQ9H606 182 aa16.27■□□□□ 0.2
VEGFA-204ENST00000372064 GNB4Q9HAV0 340 aa16.27■□□□□ 0.2
VEGFA-204ENST00000372064 BAGE3Q86Y29 109 aa16.27■□□□□ 0.19
VEGFA-204ENST00000372064 LTAP01374 205 aa16.26■□□□□ 0.19
VEGFA-204ENST00000372064 TCRAP04437 139 aa16.26■□□□□ 0.19
VEGFA-204ENST00000372064 HIST1H1EP10412 219 aaKnown RBP16.26■□□□□ 0.19
VEGFA-204ENST00000372064 C5orf64Q2M2E5 130 aa16.26■□□□□ 0.19
VEGFA-204ENST00000372064 UBTD1Q9HAC8 227 aa16.26■□□□□ 0.19
VEGFA-204ENST00000372064 RPH3ALQ9UNE2 315 aa16.26■□□□□ 0.19
VEGFA-204ENST00000372064 A8MWP6 167 aa16.26■□□□□ 0.19
VEGFA-204ENST00000372064 USF2Q15853 346 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-204ENST00000372064 UNQ6494/PRO21346Q6UXR6 183 aa16.26■□□□□ 0.19
VEGFA-204ENST00000372064 LURAP1LQ8IV03 231 aa16.26■□□□□ 0.19
VEGFA-204ENST00000372064 ZNF586Q9NXT0 402 aa16.26■□□□□ 0.19
VEGFA-204ENST00000372064 UQCRFS1P47985 274 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 KLF17Q5JT82 389 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-204ENST00000372064 REC114Q7Z4M0 266 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 TSKUQ8WUA8 353 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 OTORQ9NRC9 128 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 AKAP6Q13023 2319 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 BMPR1BO00238 502 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 PRR27Q6MZM9 219 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 NUP35Q8NFH5 326 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 TMEM68Q96MH6 324 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 Q6ZWC4 215 aa16.25■□□□□ 0.19
VEGFA-204ENST00000372064 OOSP1A8MZH6 123 aa16.24■□□□□ 0.19
VEGFA-204ENST00000372064 ZNF331Q9NQX6 463 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-204ENST00000372064 NAGKQ9UJ70 344 aa16.24■□□□□ 0.19
VEGFA-204ENST00000372064 NPIPB5A8MRT5 1133 aa16.24■□□□□ 0.19
VEGFA-204ENST00000372064 SCGB1D1O95968 90 aa16.24■□□□□ 0.19
VEGFA-204ENST00000372064 CCDC144NLQ6NUI1 221 aa16.24■□□□□ 0.19
VEGFA-204ENST00000372064 Q8N6K4 173 aa16.24■□□□□ 0.19
VEGFA-204ENST00000372064 TMEM190Q8WZ59 177 aa16.24■□□□□ 0.19
VEGFA-204ENST00000372064 SHANK2-AS3Q9BTD1 123 aa16.24■□□□□ 0.19
VEGFA-204ENST00000372064 A6NNC1 897 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 HOXB4P17483 251 aaPredicted RBP16.23■□□□□ 0.19
VEGFA-204ENST00000372064 ITLN2Q8WWU7 325 aaPredicted RBP16.23■□□□□ 0.19
VEGFA-204ENST00000372064 RBM14Q96PK6 669 aaKnown RBP16.23■□□□□ 0.19
VEGFA-204ENST00000372064 PRSS22Q9GZN4 317 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 H3BRN7 92 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 APCSP02743 223 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 SFTPCP11686 197 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 KIAA1644Q3SXP7 199 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 ZNF562Q6V9R5 426 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 ZNF492Q9P255 531 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 S4R3C0 116 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 ITPR1Q14643 2758 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 CSMD1Q96PZ7 3565 aa16.23■□□□□ 0.19
VEGFA-204ENST00000372064 EBI3Q14213 229 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 MINOS1Q5TGZ0 78 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 NEU1Q99519 415 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 MINOS1-NBL1R4GNA1 71 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 C19orf71A6NCJ1 209 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 BRS3P32247 399 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 ZNF491Q8N8L2 437 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 IGLV11-55A0A075B6I3 123 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 NCBP2LA6PVI3 153 aaKnown RBP16.22■□□□□ 0.19
VEGFA-204ENST00000372064 NDPQ00604 133 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 CT83Q5H943 113 aa16.22■□□□□ 0.19
VEGFA-204ENST00000372064 LINC00322Q6ZN03 302 aaPredicted RBP16.22■□□□□ 0.19
VEGFA-204ENST00000372064 ZNF48Q96MX3 618 aaPredicted RBP16.22■□□□□ 0.19
VEGFA-204ENST00000372064 C19orf84I3L1E1 186 aa16.21■□□□□ 0.19
VEGFA-204ENST00000372064 SRIP30626 198 aa16.21■□□□□ 0.19
VEGFA-204ENST00000372064 SLAQ13239 276 aa16.21■□□□□ 0.19
VEGFA-204ENST00000372064 FANCD2OSQ96PS1 177 aa16.21■□□□□ 0.19
VEGFA-204ENST00000372064 ASH1LQ9NR48 2969 aaKnown RBP16.21■□□□□ 0.19
VEGFA-204ENST00000372064 WI2-2373I1.2A0A1W2PRP0 233 aa16.21■□□□□ 0.18
VEGFA-204ENST00000372064 HIGD1CA8MV81 97 aa16.21■□□□□ 0.18
VEGFA-204ENST00000372064 GDF5OSQ5U4N7 250 aa16.21■□□□□ 0.18
VEGFA-204ENST00000372064 ATP5L2Q7Z4Y8 100 aa16.21■□□□□ 0.18
VEGFA-204ENST00000372064 TTC9CQ8N5M4 171 aa16.21■□□□□ 0.18
VEGFA-204ENST00000372064 ARPC1AQ92747 370 aa16.21■□□□□ 0.18
VEGFA-204ENST00000372064 SIRPDQ9H106 197 aa16.21■□□□□ 0.18
VEGFA-204ENST00000372064 RPP21Q9H633 154 aaKnown RBP16.21■□□□□ 0.18
VEGFA-204ENST00000372064 POLR3KQ9Y2Y1 108 aaPredicted RBP16.21■□□□□ 0.18
VEGFA-204ENST00000372064 GNLYP22749 145 aa16.2■□□□□ 0.18
VEGFA-204ENST00000372064 RNF125Q96EQ8 232 aa16.2■□□□□ 0.18
VEGFA-204ENST00000372064 HSPB9Q9BQS6 159 aa16.2■□□□□ 0.18
VEGFA-204ENST00000372064 IGLC2P0DOY2 106 aa16.2■□□□□ 0.18
VEGFA-204ENST00000372064 Q86TA4 180 aa16.2■□□□□ 0.18
VEGFA-204ENST00000372064 KCNS1Q96KK3 526 aa16.2■□□□□ 0.18
VEGFA-204ENST00000372064 RNF24Q9Y225 148 aa16.2■□□□□ 0.18
VEGFA-204ENST00000372064 TRBV19A0A075B6N1 114 aa16.19■□□□□ 0.18
VEGFA-204ENST00000372064 TRAV30A0A087WSZ9 112 aa16.19■□□□□ 0.18
VEGFA-204ENST00000372064 TRBV6-1A0A0K0K1D8 114 aa16.19■□□□□ 0.18
VEGFA-204ENST00000372064 A0A1B0GXF2 115 aa16.19■□□□□ 0.18
VEGFA-204ENST00000372064 VWC2LB2RUY7 222 aa16.19■□□□□ 0.18
VEGFA-204ENST00000372064 IGLV2-11P01706 119 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms