RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 SVBPQ8N300 66 aa12.16□□□□□ -0.46
PFDN4-201ENST00000371419 NPCDR1Q9BY65 106 aa12.16□□□□□ -0.46
PFDN4-201ENST00000371419 EIF5A2Q9GZV4 153 aaKnown RBP12.16□□□□□ -0.46
PFDN4-201ENST00000371419 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
PFDN4-201ENST00000371419 NPVFQ9HCQ7 196 aa12.16□□□□□ -0.46
PFDN4-201ENST00000371419 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
PFDN4-201ENST00000371419 MRPL36Q9P0J6 103 aaKnown RBP12.16□□□□□ -0.46
PFDN4-201ENST00000371419 PEMTQ9UBM1 199 aa12.16□□□□□ -0.46
PFDN4-201ENST00000371419 LGALS9O00182 355 aa12.15□□□□□ -0.46
PFDN4-201ENST00000371419 CLN5O75503 358 aa12.15□□□□□ -0.46
PFDN4-201ENST00000371419 M6PRP20645 277 aa12.15□□□□□ -0.46
PFDN4-201ENST00000371419 GPX4P36969 197 aaPredicted RBP12.15□□□□□ -0.46
PFDN4-201ENST00000371419 INSL3P51460 131 aa12.15□□□□□ -0.46
PFDN4-201ENST00000371419 SLC16A13Q7RTY0 426 aa12.15□□□□□ -0.46
PFDN4-201ENST00000371419 REC114Q7Z4M0 266 aa12.15□□□□□ -0.46
PFDN4-201ENST00000371419 SCRT1Q9BWW7 348 aa12.15□□□□□ -0.46
PFDN4-201ENST00000371419 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 ZNF320A2RRD8 509 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 WIPF1O43516 503 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 SAP30O75446 220 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 SCGB2A1O75556 95 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 SFTA3P0C7M3 94 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 RELQ04864 619 aaPredicted RBP12.14□□□□□ -0.47
PFDN4-201ENST00000371419 TMEM116Q8NCL8 245 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 CACNG8Q8WXS5 425 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 SMCO3A2RU48 225 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 RBFOX3A6NFN3 312 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 NDUFA4O00483 81 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 RND2P52198 227 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 RAB31Q13636 194 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 ACOT6Q3I5F7 207 aaPredicted RBP12.14□□□□□ -0.47
PFDN4-201ENST00000371419 FFAR4Q5NUL3 377 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 ACY3Q96HD9 319 aa12.14□□□□□ -0.47
PFDN4-201ENST00000371419 TRAV30A0A087WSZ9 112 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 SNAPINO95295 136 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 ADCYAP1P18509 176 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 ELLP55199 621 aaPredicted RBP12.13□□□□□ -0.47
PFDN4-201ENST00000371419 PMS2P11Q13670 270 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 BEAN1Q3B7T3 259 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 KPRPQ5T749 579 aaPredicted RBP12.13□□□□□ -0.47
PFDN4-201ENST00000371419 UNQ9165/PRO28630Q6UXU0 137 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 OR10G4Q8NGN3 311 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 OR10G9Q8NGN4 311 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 OR10G7Q8NGN6 311 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 NPIPB3Q92617 1050 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 SLC35E1Q96K37 410 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 ACTR3CQ9C0K3 210 aaPredicted RBP12.13□□□□□ -0.47
PFDN4-201ENST00000371419 VSIRQ9H7M9 311 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 SLC39A9Q9NUM3 307 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 UFC1Q9Y3C8 167 aa12.13□□□□□ -0.47
PFDN4-201ENST00000371419 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 A8MWP6 167 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 SCO1O75880 301 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 IFNA1P01562 189 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 CSN3P07498 182 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 GAMTQ14353 236 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 ZNF506Q5JVG8 444 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 TEPPQ6URK8 271 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
PFDN4-201ENST00000371419 SLC35B3Q9H1N7 401 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 SIGLEC8Q9NYZ4 499 aa12.12□□□□□ -0.47
PFDN4-201ENST00000371419 A0A1B0GV50 99 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 MAP1LC3B2A6NCE7 125 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 C2orf70A6NJV1 201 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 YIF1AO95070 293 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 IGLC1P0CG04 106 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 OR10J1P30954 320 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 TAGLN2P37802 199 aaKnown RBP12.11□□□□□ -0.47
PFDN4-201ENST00000371419 PPT1P50897 306 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 CCL20P78556 96 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 KHDC3LQ587J8 217 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 ZNF600Q6ZNG1 722 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 RPP25LQ8N5L8 163 aaKnown RBP12.11□□□□□ -0.47
PFDN4-201ENST00000371419 MAP1LC3BQ9GZQ8 125 aa12.11□□□□□ -0.47
PFDN4-201ENST00000371419 ZMAT5Q9UDW3 170 aaKnown RBP12.11□□□□□ -0.47
PFDN4-201ENST00000371419 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
PFDN4-201ENST00000371419 TMEM213A2RRL7 107 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 C9JQL5 133 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 IGKV1-17P01599 117 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 EGFEM1PQ0D2K5 195 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 ZNF726P1Q15940 193 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 TIGITQ495A1 244 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 TM4SF20Q53R12 229 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 LCN15Q6UWW0 184 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 ZNF414Q96IQ9 312 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 C20orf24Q9BUV8 137 aa12.1□□□□□ -0.47
PFDN4-201ENST00000371419 FOLR2P14207 255 aa12.09□□□□□ -0.47
PFDN4-201ENST00000371419 GUCA2BQ16661 112 aa12.09□□□□□ -0.47
PFDN4-201ENST00000371419 MGST2Q99735 147 aa12.09□□□□□ -0.47
PFDN4-201ENST00000371419 DAZ1Q9NQZ3 744 aaKnown RBP12.09□□□□□ -0.47
PFDN4-201ENST00000371419 PUS1Q9Y606 427 aaKnown RBP eCLIP12.09□□□□□ -0.47
PFDN4-201ENST00000371419 MEGF8Q7Z7M0 2845 aa12.09□□□□□ -0.47
PFDN4-201ENST00000371419 IGHV3OR16-8A0A075B7F1 116 aa12.08□□□□□ -0.47
PFDN4-201ENST00000371419 LOC102723971A0A1B0GUV8 181 aa12.08□□□□□ -0.47
PFDN4-201ENST00000371419 K7EMT4 169 aa12.08□□□□□ -0.47
PFDN4-201ENST00000371419 IGLV1-51P01701 117 aa12.08□□□□□ -0.47
PFDN4-201ENST00000371419 CBLN1P23435 193 aa12.08□□□□□ -0.47
PFDN4-201ENST00000371419 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.47
PFDN4-201ENST00000371419 YPEL3P61236 119 aaPredicted RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms