RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ERG28Q9UKR5 140 aa14.89□□□□□ -0.03
SNX27-202ENST00000368841 MRPS18CQ9Y3D5 142 aaKnown RBP14.89□□□□□ -0.03
SNX27-202ENST00000368841 A0A1W2PRE2 83 aa14.89□□□□□ -0.03
SNX27-202ENST00000368841 GATA4P43694 442 aa14.89□□□□□ -0.03
SNX27-202ENST00000368841 A0A087WWC5 75 aa14.88□□□□□ -0.03
SNX27-202ENST00000368841 A0A096LPF7 62 aa14.88□□□□□ -0.03
SNX27-202ENST00000368841 SYNJ2BPP57105 145 aa14.88□□□□□ -0.03
SNX27-202ENST00000368841 C3orf56Q8N813 242 aa14.88□□□□□ -0.03
SNX27-202ENST00000368841 ORAOV1Q8WV07 137 aa14.88□□□□□ -0.03
SNX27-202ENST00000368841 SPXQ9BT56 116 aa14.88□□□□□ -0.03
SNX27-202ENST00000368841 A0A087X0K7 114 aa14.88□□□□□ -0.03
SNX27-202ENST00000368841 DKK1O94907 266 aa14.88□□□□□ -0.03
SNX27-202ENST00000368841 BPESC1Q9GZL8 116 aa14.88□□□□□ -0.03
SNX27-202ENST00000368841 TRAV8-3A0A0A6YYJ7 113 aa14.87□□□□□ -0.03
SNX27-202ENST00000368841 LINC00271P0C7V0 271 aa14.87□□□□□ -0.03
SNX27-202ENST00000368841 EFNA4P52798 201 aa14.87□□□□□ -0.03
SNX27-202ENST00000368841 TSKUQ8WUA8 353 aa14.87□□□□□ -0.03
SNX27-202ENST00000368841 KLK9Q9UKQ9 250 aa14.87□□□□□ -0.03
SNX27-202ENST00000368841 LOC105371267A0A1B0GV96 52 aa14.87□□□□□ -0.03
SNX27-202ENST00000368841 LYPD3O95274 346 aa14.87□□□□□ -0.03
SNX27-202ENST00000368841 TEX43Q6ZNM6 134 aa14.87□□□□□ -0.03
SNX27-202ENST00000368841 ASPHD1Q5U4P2 390 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 ZNF479Q96JC4 524 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 TRAV9-2A0A087WT02 112 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 ZFP36L1Q07352 338 aaKnown RBP14.86□□□□□ -0.03
SNX27-202ENST00000368841 LCN12Q6JVE5 192 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 FAM110DQ8TAY7 271 aaPredicted RBP14.86□□□□□ -0.03
SNX27-202ENST00000368841 GGTLC1Q9BX51 225 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 ATXN8Q156A1 80 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST1H2BKO60814 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST1H2BJP06899 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST1H2BOP23527 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST1H2BBP33778 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST1H2BDP58876 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST1H2BCP62807 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST2H2BEQ16778 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 C6orf226Q5I0X4 101 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST1H2BHQ93079 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST1H2BNQ99877 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 HIST1H2BMQ99879 126 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 ZNF562Q6V9R5 426 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 GAFA1Q96PS6 74 aa14.86□□□□□ -0.03
SNX27-202ENST00000368841 TEX38Q6PEX7 206 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 SSBP2P81877 361 aaPredicted RBP14.85□□□□□ -0.03
SNX27-202ENST00000368841 BUB1B-PAK6H3BSN5 160 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 CSRP3P50461 194 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 OCIAD2Q56VL3 154 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 LURAP1LQ8IV03 231 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 RP1L1Q8IWN7 2480 aaPredicted RBP14.85□□□□□ -0.03
SNX27-202ENST00000368841 C8orf49Q96NF6 230 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 RALGAPA2Q2PPJ7 1873 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 A8MWV9 139 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 H0YJW9 148 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 GNB1LQ9BYB4 327 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 OSTCQ9NRP0 149 aa14.85□□□□□ -0.03
SNX27-202ENST00000368841 FER1L5A0AVI2 2057 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 ITGB1BP1O14713 200 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 TPRP12270 2363 aaKnown RBP14.84□□□□□ -0.03
SNX27-202ENST00000368841 F2Z2F3 143 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 GAGE2EQ4V326 116 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 UNQ6494/PRO21346Q6UXR6 183 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 MTURNQ8N3F0 131 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 GAGE2DQ9UEU5 116 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 LOC285556D6RIA3 1793 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 COL4A6Q14031 1691 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 EDA2RQ9HAV5 297 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 XCL2Q9UBD3 114 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 MPDZO75970 2070 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 LINC00473A8K010 186 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 CGB3P0DN86 165 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 MRAPQ8TCY5 172 aa14.84□□□□□ -0.03
SNX27-202ENST00000368841 RPL36AP83881 106 aaKnown RBP14.83□□□□□ -0.03
SNX27-202ENST00000368841 SPSB3Q6PJ21 355 aa14.83□□□□□ -0.03
SNX27-202ENST00000368841 RPL36ALQ969Q0 106 aaKnown RBP14.83□□□□□ -0.03
SNX27-202ENST00000368841 ANK1P16157 1881 aa14.83□□□□□ -0.03
SNX27-202ENST00000368841 YLPM1P49750 1951 aaKnown RBP14.83□□□□□ -0.04
SNX27-202ENST00000368841 IL18BPO95998 194 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 IGLV3-19P01714 112 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 MORN3Q6PF18 240 aaPredicted RBP14.83□□□□□ -0.04
SNX27-202ENST00000368841 LCTP09848 1927 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 LOC102723996A0A087X1L8 192 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 GUSBP1Q15486 140 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 IGHV3-38A0A0C4DH36 116 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 NABP1Q96AH0 204 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 GAGE13Q4V321 117 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 CLPSL2Q6UWE3 100 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 NUP35Q8NFH5 326 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 TMEM158Q8WZ71 300 aa14.83□□□□□ -0.04
SNX27-202ENST00000368841 Q96MF0 132 aa14.82□□□□□ -0.04
SNX27-202ENST00000368841 SAA4P35542 130 aa14.82□□□□□ -0.04
SNX27-202ENST00000368841 SUMO4Q6EEV6 95 aa14.82□□□□□ -0.04
SNX27-202ENST00000368841 TET1Q8NFU7 2136 aa14.82□□□□□ -0.04
SNX27-202ENST00000368841 PRB1P04280 392 aa14.82□□□□□ -0.04
SNX27-202ENST00000368841 ZNF114Q8NC26 417 aa14.82□□□□□ -0.04
SNX27-202ENST00000368841 TRAV9-1A0A075B6T8 112 aa14.82□□□□□ -0.04
SNX27-202ENST00000368841 CHCHD1Q96BP2 118 aaKnown RBP14.82□□□□□ -0.04
SNX27-202ENST00000368841 F5H768 121 aa14.82□□□□□ -0.04
SNX27-202ENST00000368841 IGLV3-12A0A075B6K2 115 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 F8WEM9 126 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms