RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 WDR12Q9GZL7 423 aaKnown RBP13.84□□□□□ -0.19
CKS1B-203ENST00000368439 PFDN2Q9UHV9 154 aa13.84□□□□□ -0.19
CKS1B-203ENST00000368439 SOCS3O14543 225 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 UPK1BO75841 260 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 METTL15P1P0C7V9 234 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 ATF4P18848 351 aaPredicted RBP13.83□□□□□ -0.2
CKS1B-203ENST00000368439 DLK1P80370 383 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 ARL16Q0P5N6 197 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 ACTL10Q5JWF8 245 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 MZT2BQ6NZ67 158 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 C12orf45Q8N5I9 185 aaPredicted RBP13.83□□□□□ -0.2
CKS1B-203ENST00000368439 C17orf77Q96MU5 243 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 C11orf1Q9H5F2 150 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 FBXL17Q9UF56 701 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 SLC45A2Q9UMX9 530 aa13.83□□□□□ -0.2
CKS1B-203ENST00000368439 FNDC10F2Z333 226 aa13.82□□□□□ -0.2
CKS1B-203ENST00000368439 C4BPBP20851 252 aa13.82□□□□□ -0.2
CKS1B-203ENST00000368439 SNRPD3P62318 126 aaKnown RBP13.82□□□□□ -0.2
CKS1B-203ENST00000368439 IL15RAQ13261 267 aa13.82□□□□□ -0.2
CKS1B-203ENST00000368439 ZNF846Q147U1 533 aa13.82□□□□□ -0.2
CKS1B-203ENST00000368439 BPIFCQ8NFQ6 507 aa13.82□□□□□ -0.2
CKS1B-203ENST00000368439 RARRES2Q99969 163 aa13.82□□□□□ -0.2
CKS1B-203ENST00000368439 SPP1P10451 314 aa13.81□□□□□ -0.2
CKS1B-203ENST00000368439 RRAS2P62070 204 aaPredicted RBP13.81□□□□□ -0.2
CKS1B-203ENST00000368439 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
CKS1B-203ENST00000368439 GSG1LQ6UXU4 331 aa13.81□□□□□ -0.2
CKS1B-203ENST00000368439 CYP2G1PQ6ZSU1 146 aa13.81□□□□□ -0.2
CKS1B-203ENST00000368439 OR11H2Q8NH07 326 aa13.81□□□□□ -0.2
CKS1B-203ENST00000368439 SMCO3A2RU48 225 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 ZNF98A6NK75 572 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 FAM25EA8MYX2 175 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 K7EPK0 472 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 IL5P05113 134 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 OR8I2Q8N0Y5 310 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 OR10P1Q8NGE3 313 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 C2orf50Q96LR7 162 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 SLC25A32Q9H2D1 315 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 NPVFQ9HCQ7 196 aa13.8□□□□□ -0.2
CKS1B-203ENST00000368439 H3BMM0 161 aa13.79□□□□□ -0.2
CKS1B-203ENST00000368439 ORM2P19652 201 aa13.79□□□□□ -0.2
CKS1B-203ENST00000368439 PLP1P60201 277 aa13.79□□□□□ -0.2
CKS1B-203ENST00000368439 CSNK1G2-AS1Q8NCQ2 148 aa13.79□□□□□ -0.2
CKS1B-203ENST00000368439 PPP1R14BQ96C90 147 aa13.79□□□□□ -0.2
CKS1B-203ENST00000368439 C5orf51A6NDU8 294 aa13.78□□□□□ -0.2
CKS1B-203ENST00000368439 PSMB3P49720 205 aa13.78□□□□□ -0.2
CKS1B-203ENST00000368439 DEFB1P60022 68 aa13.78□□□□□ -0.2
CKS1B-203ENST00000368439 TMEM41BQ5BJD5 291 aa13.78□□□□□ -0.2
CKS1B-203ENST00000368439 GDF5OSQ5U4N7 250 aa13.78□□□□□ -0.2
CKS1B-203ENST00000368439 OR1B1Q8NGR6 318 aa13.78□□□□□ -0.2
CKS1B-203ENST00000368439 C11orf68Q9H3H3 251 aaKnown RBP13.78□□□□□ -0.2
CKS1B-203ENST00000368439 LSM5Q9Y4Y9 91 aaKnown RBP13.78□□□□□ -0.2
CKS1B-203ENST00000368439 H3BRN7 92 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 DEDDO75618 318 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 HLA-DRB4P13762 266 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 SELENOTP62341 195 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 TMEM217Q8N7C4 229 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 TMEM147Q9BVK8 224 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 GGACTQ9BVM4 153 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 SLC25A22Q9H936 323 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 MGAT4CQ9UBM8 478 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 HLA-DRB4X5D2U9 266 aa13.77□□□□□ -0.21
CKS1B-203ENST00000368439 ZNF705EA8MWA4 302 aaPredicted RBP13.76□□□□□ -0.21
CKS1B-203ENST00000368439 L7N2F9 121 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 ISLRO14498 428 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 LINC00869P0C866 280 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 ID1P41134 155 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 VAMP2P63027 116 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 SLC38A11Q08AI6 406 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 PMS2P11Q13670 270 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 TEPPQ6URK8 271 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 PATE2Q6UY27 113 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 NRARPQ7Z6K4 114 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 Q8NAQ8 132 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 ENKURQ8TC29 256 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 SHANK2-AS3Q9BTD1 123 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 SCRT1Q9BWW7 348 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 SLC25A39Q9BZJ4 359 aaPredicted RBP13.76□□□□□ -0.21
CKS1B-203ENST00000368439 SAV1Q9H4B6 383 aaPredicted RBP13.76□□□□□ -0.21
CKS1B-203ENST00000368439 BATF3Q9NR55 127 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 CLEC5AQ9NY25 188 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 DOK5Q9P104 306 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 X6R8D5 127 aa13.76□□□□□ -0.21
CKS1B-203ENST00000368439 FAM24AA6NFZ4 105 aa13.75□□□□□ -0.21
CKS1B-203ENST00000368439 GALR1P47211 349 aa13.75□□□□□ -0.21
CKS1B-203ENST00000368439 RAB32Q13637 225 aa13.75□□□□□ -0.21
CKS1B-203ENST00000368439 C20orf173Q96LM9 149 aa13.75□□□□□ -0.21
CKS1B-203ENST00000368439 LINC00052Q96N35 136 aa13.75□□□□□ -0.21
CKS1B-203ENST00000368439 RSG1Q9BU20 258 aa13.75□□□□□ -0.21
CKS1B-203ENST00000368439 HIGD1AQ9Y241 93 aa13.75□□□□□ -0.21
CKS1B-203ENST00000368439 CXorf65A6NEN9 183 aa13.74□□□□□ -0.21
CKS1B-203ENST00000368439 DEFB4AO15263 64 aa13.74□□□□□ -0.21
CKS1B-203ENST00000368439 HYPMO75409 117 aa13.74□□□□□ -0.21
CKS1B-203ENST00000368439 MEOX2P50222 304 aa13.74□□□□□ -0.21
CKS1B-203ENST00000368439 FOXI2Q6ZQN5 318 aa13.74□□□□□ -0.21
CKS1B-203ENST00000368439 CLUHP3Q96NS8 147 aa13.74□□□□□ -0.21
CKS1B-203ENST00000368439 GPR82Q96P67 336 aa13.74□□□□□ -0.21
CKS1B-203ENST00000368439 UHRF2Q96PU4 802 aa13.74□□□□□ -0.21
CKS1B-203ENST00000368439 AGPAT2O15120 278 aa13.73□□□□□ -0.21
CKS1B-203ENST00000368439 RBMY1A1P0DJD3 496 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms