RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 SLC25A39Q9BZJ4 359 aaPredicted RBP6.83□□□□□ -1.32
PTPRK-206ENST00000368215 OTORQ9NRC9 128 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 F11RQ9Y624 299 aaKnown RBP6.83□□□□□ -1.32
PTPRK-206ENST00000368215 A0A1B0GUT8 65 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 M0QZ24 198 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 MGPP08493 103 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 RNF224P0DH78 156 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 DLX6P56179 175 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 PSG9Q00887 426 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 C3orf36Q3SXR2 165 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 VMO1Q7Z5L0 202 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 GNB1LQ9BYB4 327 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 CHODLQ9H9P2 273 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 SELENOKQ9Y6D0 94 aa6.83□□□□□ -1.32
PTPRK-206ENST00000368215 PIEZO1Q92508 2521 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 IGHV3-11P01762 117 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 TRGV3P03979 118 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 NPPCP23582 126 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 PDLIM4P50479 330 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 PTTG1IPP53801 180 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 ATP5G2Q06055 141 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 PMCHL1Q16048 86 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 CDPF1Q6NVV7 123 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 RBPMS2Q6ZRY4 209 aaKnown RBP6.82□□□□□ -1.32
PTPRK-206ENST00000368215 M0QZK8 103 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 CENPVQ7Z7K6 275 aaPredicted RBP6.82□□□□□ -1.32
PTPRK-206ENST00000368215 PIMREGQ9BSJ6 248 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 NCOR1P1Q9H4R4 102 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 IFITM10A6NMD0 228 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 M0R3E3 92 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 RPL15P61313 204 aaKnown RBP6.82□□□□□ -1.32
PTPRK-206ENST00000368215 CX3CL1P78423 397 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 IGFL4Q6B9Z1 124 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 TMEM136Q6ZRR5 245 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 TMEM219Q86XT9 240 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 TRGV9Q99603 122 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 PMCHL2Q9BQD1 86 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 FNDC4Q9H6D8 234 aaPredicted RBP6.82□□□□□ -1.32
PTPRK-206ENST00000368215 UQCR10Q9UDW1 63 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 PSG8Q9UQ74 426 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 ANKRD11Q6UB99 2663 aaPredicted RBP6.82□□□□□ -1.32
PTPRK-206ENST00000368215 A0A1B0GWJ7 208 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 SIAH2O43255 324 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 RHOGP84095 191 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 TMEM116Q8NCL8 245 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 CCL19Q99731 98 aa6.82□□□□□ -1.32
PTPRK-206ENST00000368215 A1L4Q6 167 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 ZNF324O75467 553 aaPredicted RBP6.81□□□□□ -1.32
PTPRK-206ENST00000368215 TCRAP04437 139 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 PVRIGQ6DKI7 326 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 TSKUQ8WUA8 353 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 EEF1AKMT3Q96AZ1 226 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 AP5S1Q9NUS5 200 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 BTF3P20290 206 aaKnown RBP6.81□□□□□ -1.32
PTPRK-206ENST00000368215 GUSBP1Q15486 140 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 C5orf64Q2M2E5 130 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 NUP35Q8NFH5 326 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 MSRB2Q9Y3D2 182 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 NCKAP5O14513 1909 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 SHISA9B4DS77 424 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 FNDC10F2Z333 226 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 APOHP02749 345 aaPredicted RBP6.81□□□□□ -1.32
PTPRK-206ENST00000368215 PPIFP30405 207 aaKnown RBP6.81□□□□□ -1.32
PTPRK-206ENST00000368215 PRR20EP86478 221 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 PRR20CP86479 221 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 PRR20DP86480 221 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 PRR20BP86481 221 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 PRR20AP86496 221 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 VWC2Q2TAL6 325 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 ZNF329Q86UD4 541 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 OR4C5Q8NGB2 326 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 NDUFAF3Q9BU61 184 aa6.81□□□□□ -1.32
PTPRK-206ENST00000368215 EXPH5Q8NEV8 1989 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 NMUP48645 174 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 COL5A1-AS1Q5SY13 56 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 ZNF664Q8N3J9 261 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 FAM168AQ92567 244 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 TMEM70Q9BUB7 260 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 IGKV2-40A0A087WW87 121 aaPredicted RBP6.8□□□□□ -1.32
PTPRK-206ENST00000368215 SNAI2O43623 268 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 IGKV2D-40P01614 121 aaPredicted RBP6.8□□□□□ -1.32
PTPRK-206ENST00000368215 NBL1P41271 181 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 SAPCD1Q5SSQ6 148 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 DDB2Q92466 427 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 SLC25A2Q9BXI2 301 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 LSM4Q9Y4Z0 139 aaKnown RBP6.8□□□□□ -1.32
PTPRK-206ENST00000368215 POU2AF1Q16633 256 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 RITA1Q96K30 269 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 C7orf69Q9H7B7 122 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 DYSFO75923 2080 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 GNLYP22749 145 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
PTPRK-206ENST00000368215 TNRC6AQ8NDV7 1962 aaKnown RBP6.8□□□□□ -1.32
PTPRK-206ENST00000368215 NDUFS7O75251 213 aa6.79□□□□□ -1.32
PTPRK-206ENST00000368215 C15orf32Q32M92 178 aa6.79□□□□□ -1.32
PTPRK-206ENST00000368215 TM4SF20Q53R12 229 aa6.79□□□□□ -1.32
PTPRK-206ENST00000368215 LCN12Q6JVE5 192 aa6.79□□□□□ -1.32
PTPRK-206ENST00000368215 BRD3OSQ6XYD6 125 aa6.79□□□□□ -1.32
PTPRK-206ENST00000368215 ZNF841Q6ZN19 808 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms