RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SAA4P35542 130 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 APOC4P55056 127 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 SRSF4Q08170 494 aaKnown RBP12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 LAIR2Q6ISS4 152 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 PAQR4Q8N4S7 273 aaPredicted RBP12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 J3QKU1 62 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 MDS2Q8NDY4 140 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 ANAPC13Q9BS18 74 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 RNF126Q9BV68 326 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 NABP1Q96AH0 204 aa12.84□□□□□ -0.35
NUCKS1-201ENST00000367142 MPZP25189 248 aa12.83□□□□□ -0.35
NUCKS1-201ENST00000367142 DEFB131AP59861 70 aa12.83□□□□□ -0.35
NUCKS1-201ENST00000367142 Q0VFX4 171 aa12.83□□□□□ -0.35
NUCKS1-201ENST00000367142 LYPD1Q8N2G4 141 aa12.83□□□□□ -0.35
NUCKS1-201ENST00000367142 FOXG1P55316 489 aaPredicted RBP12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 KLF17Q5JT82 389 aaPredicted RBP12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 NKAPP1Q8N9T2 125 aa12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 TMEM126AQ9H061 195 aa12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 A0A0A6YYD4 124 aa12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 OVOL3O00110 214 aa12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 SPATA31B1PQ5VZV4 182 aa12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 MEGF9Q9H1U4 602 aa12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 ZNF319Q9P2F9 582 aa12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 SIGLEC9Q9Y336 463 aa12.83□□□□□ -0.36
NUCKS1-201ENST00000367142 Q6ZS92 163 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 DLX4Q92988 240 aaPredicted RBP12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 CASP8AP2Q9UKL3 1982 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 SRSF8Q9BRL6 282 aaKnown RBP12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 CGB7P0DN87 165 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 SAMD5Q5TGI4 173 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 ANKRD31Q8N7Z5 1873 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 DEFB104AQ8WTQ1 72 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 IGKV1-12A0A0C4DH73 117 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 IGKV1D-12P01611 117 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 PRIMA1Q86XR5 153 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 LY6G5BQ8NDX9 201 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 VSIRQ9H7M9 311 aa12.82□□□□□ -0.36
NUCKS1-201ENST00000367142 RBMY1FQ15415 496 aaKnown RBP12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 TRPT1Q86TN4 253 aaKnown RBP12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 Q8TAT8 98 aa12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 MGST2Q99735 147 aa12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 LYPD3O95274 346 aa12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 PCP4P48539 62 aa12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 IFITM2Q01629 132 aa12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 RUSC1-AS1Q66K80 236 aa12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 ZNF48Q96MX3 618 aaPredicted RBP12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 FAM110DQ8TAY7 271 aaPredicted RBP12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 SNHG12Q9BXW3 62 aa12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 LHBP01229 141 aa12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 WFDC1Q9HC57 220 aa12.81□□□□□ -0.36
NUCKS1-201ENST00000367142 RP1L1Q8IWN7 2480 aaPredicted RBP12.8□□□□□ -0.36
NUCKS1-201ENST00000367142 A0A087WWL8 130 aa12.8□□□□□ -0.36
NUCKS1-201ENST00000367142 A8MXK9 166 aa12.8□□□□□ -0.36
NUCKS1-201ENST00000367142 PRTN3P24158 256 aa12.8□□□□□ -0.36
NUCKS1-201ENST00000367142 ZMAT4Q9H898 229 aa12.8□□□□□ -0.36
NUCKS1-201ENST00000367142 IGHG3P01860 377 aa12.8□□□□□ -0.36
NUCKS1-201ENST00000367142 RHODO00212 210 aa12.79□□□□□ -0.36
NUCKS1-201ENST00000367142 TRBV25-1A0A075B6N4 114 aa12.79□□□□□ -0.36
NUCKS1-201ENST00000367142 A6NNC1 897 aa12.79□□□□□ -0.36
NUCKS1-201ENST00000367142 UBE2E1P51965 193 aa12.79□□□□□ -0.36
NUCKS1-201ENST00000367142 IGKV1D-8A0A087WSZ0 117 aa12.79□□□□□ -0.36
NUCKS1-201ENST00000367142 C2orf82Q6UX34 121 aa12.79□□□□□ -0.36
NUCKS1-201ENST00000367142 LYPD2Q6UXB3 125 aa12.79□□□□□ -0.36
NUCKS1-201ENST00000367142 TRAV3A0A0B4J244 114 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 IGFL4Q6B9Z1 124 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 F8VVB4 439 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 F8VWA3 439 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 RPRMLQ8N4K4 120 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 XCL2Q9UBD3 114 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 GAGE12JA6NER3 117 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 EFNA2O43921 213 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 SSBP2P81877 361 aaPredicted RBP12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 GAGE1Q13065 139 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 GAGE4Q13068 117 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 GAGE5Q13069 117 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 ARFGEF1Q9Y6D6 1849 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 LRRC37AA6NMS7 1700 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 RBBP6Q7Z6E9 1792 aaKnown RBP12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 TBX6O95947 436 aaPredicted RBP12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 MESP1Q9BRJ9 268 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 LIME1Q9H400 295 aa12.78□□□□□ -0.36
NUCKS1-201ENST00000367142 K7ENP7 123 aa12.77□□□□□ -0.36
NUCKS1-201ENST00000367142 UNC13CQ8NB66 2214 aa12.77□□□□□ -0.36
NUCKS1-201ENST00000367142 IGHV1-69DA0A0B4J2H0 117 aa12.77□□□□□ -0.36
NUCKS1-201ENST00000367142 E7EQL1 145 aa12.77□□□□□ -0.36
NUCKS1-201ENST00000367142 J3QLI3 93 aa12.77□□□□□ -0.36
NUCKS1-201ENST00000367142 IGHV1-69P01742 117 aa12.77□□□□□ -0.36
NUCKS1-201ENST00000367142 LURAP1LQ8IV03 231 aa12.77□□□□□ -0.36
NUCKS1-201ENST00000367142 ZFC3H1O60293 1989 aaKnown RBP12.77□□□□□ -0.37
NUCKS1-201ENST00000367142 CFHR3Q02985 330 aa12.77□□□□□ -0.37
NUCKS1-201ENST00000367142 MST1LQ2TV78 715 aa12.77□□□□□ -0.37
NUCKS1-201ENST00000367142 ZNF114Q8NC26 417 aa12.77□□□□□ -0.37
NUCKS1-201ENST00000367142 IGKV1-27A0A075B6S5 117 aa12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 MST1P26927 711 aa12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 SPXQ9BT56 116 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms