RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 HOXD3P31249 432 aaPredicted RBP8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 PSMB3P49720 205 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 LY6EQ16553 131 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 UNQ5815/PRO19632Q6UWF5 114 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 SLC35E3Q7Z769 313 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 OR1L4Q8NGR5 311 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 GATAD1Q8WUU5 269 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 RARRES2Q99969 163 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 MRPL32Q9BYC8 188 aaKnown RBP8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 SLC35B3Q9H1N7 401 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 SERTAD4Q9NUC0 356 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 GNG13Q9P2W3 67 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 TRAV30A0A087WSZ9 112 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 F8W036 122 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 CXorf1O96002 111 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 IGHG2P01859 326 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 IGF1P05019 195 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 SFTA3P0C7M3 94 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 IGLC1P0CG04 106 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 ADCYAP1P18509 176 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 GATA2P23769 480 aaPredicted RBP8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 FCGR2BP31994 310 aaPredicted RBP8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 PLP1P60201 277 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 ZNF90Q03938 601 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 ICAM4Q14773 271 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 HAGHQ16775 308 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 C19orf54Q5BKX5 351 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 CCDC28AQ8IWP9 274 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 OR5T1Q8NG75 326 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 VN1R17PQ8TDU5 208 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 PFDN5Q99471 154 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 MANBALQ9NQG1 85 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 VAX2Q9UIW0 290 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 FUT9Q9Y231 359 aa8.7□□□□□ -1.02
CSNK1E-202ENST00000366216 ELOA3CA0A087WX78 387 aaPredicted RBP8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 TRBV9A0A0B4J1U6 114 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 IGHV3-21A0A0B4J1V1 117 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 A0A1W2PRX2 142 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 HMGB3O15347 200 aaKnown RBP8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 BRI3O95415 125 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 FABP1P07148 127 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 PF4V1P10720 104 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 NPBWR1P48145 328 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 MFAP4P55083 255 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 TAS2R45P59539 299 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 ECSCRQ19T08 205 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 FAM78BQ5VT40 261 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 TMEM37Q8WXS4 190 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 TXN2Q99757 166 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 ZNF702PQ9H963 129 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 SEPSECSQ9HD40 501 aaKnown RBP8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 DNAJC4Q9NNZ3 241 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 ZNF580Q9UK33 172 aa8.69□□□□□ -1.02
CSNK1E-202ENST00000366216 PLECQ15149 4684 aaKnown RBP8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 TRAV41A0A0B4J266 112 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 SH2D7A6NKC9 451 aaPredicted RBP8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 LINC01548A6NM66 108 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 COX7A2P2O60397 106 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 EIF3GO75821 320 aaKnown RBP eCLIP8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 NDUFB8O95169 186 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 APOC3P02656 99 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 PF4P02776 101 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 SRP19P09132 144 aaKnown RBP8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 ARL14EPLP0DKL9 152 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 SPATA31B1PQ5VZV4 182 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 PQLC2Q6ZP29 291 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 Q6ZS46 218 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 MIR17HGQ75NE6 70 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 Q8N2B8 174 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 RXFP4Q8TDU9 374 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 DPF1Q92782 380 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 C21orf62Q9NYP8 219 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 TECRQ9NZ01 308 aaKnown RBP8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 FBXL7Q9UJT9 491 aa8.68□□□□□ -1.02
CSNK1E-202ENST00000366216 G3V318 75 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 H3BUA1 57 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 SCGB2A1O75556 95 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 OR2J3O76001 311 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 TOMM40O96008 361 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 IGKV1-17P01599 117 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 C8orf88P0DMB2 117 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 GCHFRP30047 84 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 YPEL3P61236 119 aaPredicted RBP8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 C10orf113Q5VZT2 155 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 PATE2Q6UY27 113 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 SVBPQ8N300 66 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 NECAP1Q8NC96 275 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 ATP6V0BQ99437 205 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 TXNDC17Q9BRA2 123 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 ARL2-SNX15V9GYD0 113 aa8.67□□□□□ -1.02
CSNK1E-202ENST00000366216 F8W735 103 aaPredicted RBP8.66□□□□□ -1.02
CSNK1E-202ENST00000366216 AP4M1O00189 453 aa8.66□□□□□ -1.02
CSNK1E-202ENST00000366216 GNG7O60262 68 aa8.66□□□□□ -1.02
CSNK1E-202ENST00000366216 HYPMO75409 117 aa8.66□□□□□ -1.02
CSNK1E-202ENST00000366216 RD3LP0DJH9 198 aa8.66□□□□□ -1.02
CSNK1E-202ENST00000366216 PSG1P11464 419 aa8.66□□□□□ -1.02
CSNK1E-202ENST00000366216 DEFA5Q01523 94 aa8.66□□□□□ -1.02
CSNK1E-202ENST00000366216 MEF2BQ02080 365 aaPredicted RBP8.66□□□□□ -1.02
CSNK1E-202ENST00000366216 TIGITQ495A1 244 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms