RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 IZUMO1RA6ND01 250 aa8.63□□□□□ -1.03
CACNA1S-201ENST00000362061 SMIM6P0DI80 62 aa8.63□□□□□ -1.03
CACNA1S-201ENST00000362061 SRSF1Q07955 248 aaKnown RBP eCLIP8.63□□□□□ -1.03
CACNA1S-201ENST00000362061 CBY1Q9Y3M2 126 aa8.63□□□□□ -1.03
CACNA1S-201ENST00000362061 THSD7BQ9C0I4 1608 aa8.63□□□□□ -1.03
CACNA1S-201ENST00000362061 GREB1Q4ZG55 1949 aa8.63□□□□□ -1.03
CACNA1S-201ENST00000362061 CCL20P78556 96 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 IMMP2LQ96T52 175 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 ZMAT4Q9H898 229 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 UQCR10Q9UDW1 63 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 F2Z2F3 143 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 F5H768 121 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 TTC9CQ8N5M4 171 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 PRDM13Q9H4Q3 707 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 TDGF1P3P51864 188 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 TMEM86BQ8N661 226 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 COL4A6Q14031 1691 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 ZNF98A6NK75 572 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 PKDREJQ9NTG1 2253 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 ZNF138P52744 262 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 DAD1P61803 113 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 ZNF876PQ49A33 203 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 COL5A1-AS1Q5SY13 56 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 EXOC3-AS1Q8N2X6 119 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 COQ2Q96H96 371 aa8.62□□□□□ -1.03
CACNA1S-201ENST00000362061 TRAV3A0A0B4J244 114 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 EVI2AP22794 236 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 MRAPQ8TCY5 172 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 PNRC2Q9NPJ4 139 aaKnown RBP8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 MRPL16Q9NX20 251 aaKnown RBP8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 WDR83OSQ9Y284 106 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 A0A0U1RRA0 63 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 SOD3P08294 240 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 CFHR2P36980 270 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 S100A7L2Q5SY68 101 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 LINC00477Q96M19 166 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 PMCHL2Q9BQD1 86 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 C5orf63A6NC05 138 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 ATP6V0E1O15342 81 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 LINC00158P58513 81 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 NR2C2APQ86WQ0 139 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 TRGV9Q99603 122 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 DOCK7Q96N67 2140 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 ID3Q02535 119 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 ORMDL2Q53FV1 153 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 RNF182Q8N6D2 247 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 SDHCQ99643 169 aaPredicted RBP8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 EREGO14944 169 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 TREML4Q6UXN2 200 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 DOCK8Q8NF50 2099 aa8.61□□□□□ -1.03
CACNA1S-201ENST00000362061 OR5A1Q8NGJ0 315 aa8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 Q6P435 159 aa8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 SSBP4Q9BWG4 385 aaPredicted RBP8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 CST9LQ9H4G1 147 aa8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 PPBPP02775 128 aa8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 SRP19P09132 144 aaKnown RBP8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 APOC4P55056 127 aa8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 HOXA3O43365 443 aaPredicted RBP8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 APOMO95445 188 aa8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 IGFL4Q6B9Z1 124 aa8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 NRN1Q9NPD7 142 aa8.6□□□□□ -1.03
CACNA1S-201ENST00000362061 MUC6Q6W4X9 2439 aa8.59□□□□□ -1.03
CACNA1S-201ENST00000362061 ZFHX2Q9C0A1 2572 aaPredicted RBP8.59□□□□□ -1.03
CACNA1S-201ENST00000362061 MST1LQ2TV78 715 aa8.59□□□□□ -1.03
CACNA1S-201ENST00000362061 TMEM249Q2WGJ8 235 aa8.59□□□□□ -1.03
CACNA1S-201ENST00000362061 JPT2Q9H910 190 aa8.59□□□□□ -1.03
CACNA1S-201ENST00000362061 DEFB113Q30KQ7 82 aa8.59□□□□□ -1.03
CACNA1S-201ENST00000362061 ZNF562Q6V9R5 426 aa8.59□□□□□ -1.03
CACNA1S-201ENST00000362061 SCN8AQ9UQD0 1980 aa8.59□□□□□ -1.04
CACNA1S-201ENST00000362061 SNAI2O43623 268 aa8.59□□□□□ -1.04
CACNA1S-201ENST00000362061 NAPSAO96009 420 aa8.59□□□□□ -1.04
CACNA1S-201ENST00000362061 HEATR1Q9H583 2144 aaKnown RBP8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 LINC00473A8K010 186 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 DEFB104AQ8WTQ1 72 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 PLP1P60201 277 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 FAM215AQ9Y5M1 114 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 CGB3P0DN86 165 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 GGTLC1Q9BX51 225 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 Q8TAT8 98 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 C1orf159Q96HA4 380 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 G3V318 75 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 J3QRE1 110 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 TOMM40O96008 361 aa8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 CA1P00915 261 aaPredicted RBP8.58□□□□□ -1.04
CACNA1S-201ENST00000362061 PHLDA1Q8WV24 401 aaPredicted RBP8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 CFHR3Q02985 330 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 RFNGQ9Y644 331 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 KIF26BQ2KJY2 2108 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 MPZP25189 248 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 LINC00205P59089 165 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 C5orf24Q7Z6I8 188 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 Q8TCH9 128 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 ZNRD1Q9P1U0 126 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 TRAV9-1A0A075B6T8 112 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 IGKV1-16P04430 117 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 FAM19A2Q8N3H0 131 aa8.57□□□□□ -1.04
CACNA1S-201ENST00000362061 FER1L5A0AVI2 2057 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms