RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CACNA1AO00555 2505 aa11.34□□□□□ -0.59
COL6A1-201ENST00000361866 ZNF257Q9Y2Q1 563 aa11.33□□□□□ -0.59
COL6A1-201ENST00000361866 M0R3E3 92 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 PSG1P11464 419 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 KHDC1LQ5JSQ8 128 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 TPTE2P1Q5T6R2 138 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 MDS2Q8NDY4 140 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 LINC01560Q8TB33 94 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 C11orf1Q9H5F2 150 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 PIEZO1Q92508 2521 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 MMP23AO75900 390 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 IGLL1P15814 213 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 PPP1R27Q86WC6 154 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 ORMDL3Q8N138 153 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 NCR2O95944 276 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 LY96Q9Y6Y9 160 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 FAM208BQ5VWN6 2430 aa11.33□□□□□ -0.6
COL6A1-201ENST00000361866 SYS1-DBNDD2H3BUS1 97 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 H7C2G1 150 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 NDUFS8O00217 210 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 CHODLQ9H9P2 273 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 PSG8Q9UQ74 426 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 Q6ZSR3 168 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 NPIPB5A8MRT5 1133 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 IGKV3-15P01624 115 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 TCRAP04437 139 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 PSMB2P49721 201 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 SMAGPQ0VAQ4 97 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 FOXC2Q99958 501 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
COL6A1-201ENST00000361866 ACACBO00763 2458 aa11.31□□□□□ -0.6
COL6A1-201ENST00000361866 SPACA3Q8IXA5 215 aa11.31□□□□□ -0.6
COL6A1-201ENST00000361866 C1RLQ9NZP8 487 aa11.31□□□□□ -0.6
COL6A1-201ENST00000361866 COX11Q9Y6N1 276 aa11.31□□□□□ -0.6
COL6A1-201ENST00000361866 CSPG4Q6UVK1 2322 aa11.31□□□□□ -0.6
COL6A1-201ENST00000361866 CD59P13987 128 aa11.31□□□□□ -0.6
COL6A1-201ENST00000361866 EVI2AP22794 236 aa11.31□□□□□ -0.6
COL6A1-201ENST00000361866 UBTD1Q9HAC8 227 aa11.31□□□□□ -0.6
COL6A1-201ENST00000361866 F2RL2O00254 374 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 IGLV2-14P01704 120 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 LOXL3P58215 753 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 TEX43Q6ZNM6 134 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 TMEM14BQ9NUH8 114 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
COL6A1-201ENST00000361866 SLC25A15Q9Y619 301 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 SOX21Q9Y651 276 aaPredicted RBP11.3□□□□□ -0.6
COL6A1-201ENST00000361866 MEF2CQ06413 473 aaPredicted RBP11.3□□□□□ -0.6
COL6A1-201ENST00000361866 TMEM200BQ69YZ2 307 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 CENPVQ7Z7K6 275 aaPredicted RBP11.3□□□□□ -0.6
COL6A1-201ENST00000361866 ZNF295-AS1Q8N0V1 137 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 DPF1Q92782 380 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 C15orf65H3BRN8 121 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 GUSBP1Q15486 140 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 TMEM30BQ3MIR4 351 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 C16orf92Q96LL3 132 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 RABAC1Q9UI14 185 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 KIR2DL5BA0A0G2JN68 375 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 KIR2DL5BA0A0G2JPC4 375 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 SRRM4A7MD48 611 aaKnown RBP11.3□□□□□ -0.6
COL6A1-201ENST00000361866 KIR2DL5AQ8N109 375 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 RPRMLQ8N4K4 120 aa11.3□□□□□ -0.6
COL6A1-201ENST00000361866 MRPL27Q9P0M9 148 aaKnown RBP11.3□□□□□ -0.6
COL6A1-201ENST00000361866 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 FER1L6-AS1Q8NA97 138 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 RNF125Q96EQ8 232 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 PLSCR4Q9NRQ2 329 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 D6R8Y8 96 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 H0YJW9 148 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 M0R381 172 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 WNT2P09544 360 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 HIST1H1AQ02539 215 aaPredicted RBP11.29□□□□□ -0.6
COL6A1-201ENST00000361866 OR2K2Q8NGT1 345 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 UCNP55089 124 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 WNK1Q9H4A3 2382 aa11.29□□□□□ -0.6
COL6A1-201ENST00000361866 ATP5L2Q7Z4Y8 100 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 ORAOV1Q8WV07 137 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 PTPN13Q12923 2485 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 CCL21O00585 134 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 C21orf62Q9NYP8 219 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 SMKR1H3BMG3 65 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
COL6A1-201ENST00000361866 ARMS2P0C7Q2 107 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 C8orf46Q8TAG6 207 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 Q8TAT8 98 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 DEFB104AQ8WTQ1 72 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 NEUROG1Q92886 237 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
COL6A1-201ENST00000361866 GAFA1Q96PS6 74 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 TMEM133Q9H2Q1 129 aa11.28□□□□□ -0.6
COL6A1-201ENST00000361866 TLN1Q9Y490 2541 aaKnown RBP11.27□□□□□ -0.6
COL6A1-201ENST00000361866 IFI27L1Q96BM0 104 aa11.27□□□□□ -0.6
COL6A1-201ENST00000361866 C5orf30Q96GV9 206 aa11.27□□□□□ -0.6
COL6A1-201ENST00000361866 LEPP41159 167 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 PDLIM4P50479 330 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 CCDC144NLQ6NUI1 221 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms