RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ATP6V0E1O15342 81 aa11.21□□□□□ -0.62
CTR9-201ENST00000361367 SPRNQ5BIV9 151 aa11.21□□□□□ -0.62
CTR9-201ENST00000361367 IL36BQ9NZH7 164 aa11.21□□□□□ -0.62
CTR9-201ENST00000361367 PSG8Q9UQ74 426 aa11.21□□□□□ -0.62
CTR9-201ENST00000361367 CD33P20138 364 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
CTR9-201ENST00000361367 KLHL30-AS1Q8NEE0 82 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 ASCL2Q99929 193 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 PRO1933Q9H354 126 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 ZNF98A6NK75 572 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 IGHV2-5P01817 119 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 SCGB1D4Q6XE38 83 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 TRBV9A0A0B4J1U6 114 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 WIPF3A6NGB9 483 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 SAP30O75446 220 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 PAX1P15863 534 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 RPL23P62829 140 aaKnown RBP11.2□□□□□ -0.62
CTR9-201ENST00000361367 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
CTR9-201ENST00000361367 FAM223BA6NKX1 122 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 PSMG4Q5JS54 123 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 FAM223AQ8IWN6 122 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 RFNGQ9Y644 331 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 UBE2L6O14933 153 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 NUDT3O95989 172 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 FOXA3P55318 350 aaPredicted RBP11.19□□□□□ -0.62
CTR9-201ENST00000361367 LCNL1Q6ZST4 164 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 KIR2DL4Q99706 377 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 HSPB9Q9BQS6 159 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 ZFP30Q9Y2G7 519 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 NDPQ00604 133 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 FER1L6-AS1Q8NA97 138 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 VN1R17PQ8TDU5 208 aa11.19□□□□□ -0.62
CTR9-201ENST00000361367 FBXL19-AS1Q494R0 122 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 PRORYQ9H606 182 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 Q6AWC8 147 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 Q6ZSR3 168 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 RNASE7Q9H1E1 156 aaKnown RBP11.18□□□□□ -0.62
CTR9-201ENST00000361367 LHBP01229 141 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 EMP1P54849 157 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 SRSF3P84103 164 aaKnown RBP11.18□□□□□ -0.62
CTR9-201ENST00000361367 DIAPH2-AS1Q14236 149 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 DIRC3C9JPN6 131 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 G3V318 75 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 LEPROTL1O95214 131 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 PRB4P10163 310 aaPredicted RBP11.18□□□□□ -0.62
CTR9-201ENST00000361367 NDUFA4L2Q9NRX3 87 aa11.18□□□□□ -0.62
CTR9-201ENST00000361367 CEP192Q8TEP8 1941 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 OVOL1O14753 267 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 IGKV1-39P01597 117 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 IGKV1D-39P04432 117 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 KCNS1Q96KK3 526 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 TBX15Q96SF7 602 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 KLK15Q9H2R5 256 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 PEF1Q9UBV8 284 aaKnown RBP11.17□□□□□ -0.62
CTR9-201ENST00000361367 IGHV4-61A0A0C4DH41 118 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 CD7P09564 240 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 ZNF688P0C7X2 276 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
CTR9-201ENST00000361367 EXOC3-AS1Q8N2X6 119 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 FAM110DQ8TAY7 271 aaPredicted RBP11.17□□□□□ -0.62
CTR9-201ENST00000361367 AGMATQ9BSE5 352 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 ANKRD11Q6UB99 2663 aaPredicted RBP11.17□□□□□ -0.62
CTR9-201ENST00000361367 TRAV1-1A0A0B4J248 108 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 HIGD1CA8MV81 97 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 H7C1H1 209 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 OVOL3O00110 214 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 FBLN7Q53RD9 439 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 TMEM136Q6ZRR5 245 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 C1orf122Q6ZSJ8 110 aa11.17□□□□□ -0.62
CTR9-201ENST00000361367 TRAV21A0A0B4J279 112 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 LYL1P12980 280 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 DAZAP2Q15038 168 aaPredicted RBP11.16□□□□□ -0.62
CTR9-201ENST00000361367 DEFB113Q30KQ7 82 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 SNCGO76070 127 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 IGHV4-39P01824 125 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 LEPP41159 167 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 GTSCR1Q86UQ5 136 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 CD5P06127 495 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 UTRNP46939 3433 aa11.16□□□□□ -0.62
CTR9-201ENST00000361367 TRGV2A0A075B6R0 118 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 TOMM40O96008 361 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 REC114Q7Z4M0 266 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 ZNF502Q8TBZ5 544 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 OR10AG1Q8NH19 301 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 WFDC12Q8WWY7 111 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 RHPN1-AS1Q9BWJ2 59 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 PAM16Q9Y3D7 125 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 SOX21Q9Y651 276 aaPredicted RBP11.15□□□□□ -0.62
CTR9-201ENST00000361367 IGHV4-30-2A0A087WSY4 118 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 NDUFB8O95169 186 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 VAMP3Q15836 100 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 C19orf54Q5BKX5 351 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 C9orf139Q6ZV77 190 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 TPSG1Q9NRR2 321 aa11.15□□□□□ -0.62
CTR9-201ENST00000361367 TMEM50AO95807 157 aa11.14□□□□□ -0.63
CTR9-201ENST00000361367 NRGNQ92686 78 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms