RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 EFNB3Q15768 340 aa16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 PEF1Q9UBV8 284 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 LYPD3O95274 346 aa16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 ZNF876PQ49A33 203 aa16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 TTC32Q5I0X7 151 aa16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 SRRM5B3KS81 715 aa16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 CNOT1A5YKK6 2376 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 MLANAQ16655 118 aa16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 SLC25A48Q6ZT89 311 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 UQCR10Q9UDW1 63 aa16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 CADP27708 2225 aa16.6■□□□□ 0.25
CDC42BPB-201ENST00000361246 IZUMO1RA6ND01 250 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 SDHCQ99643 169 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 LSM4Q9Y4Z0 139 aaKnown RBP16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 H0YJW9 148 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 CRYGSP22914 178 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 BMPERQ8N8U9 685 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 OVOL1O14753 267 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 ADMP35318 185 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 RNF182Q8N6D2 247 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 CEP250Q9BV73 2442 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 CGB7P0DN87 165 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 C5orf64Q2M2E5 130 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 LRRK1Q38SD2 2015 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 TRBV7-1A0A0A6YYK4 115 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 HBDP02042 147 aa16.59■□□□□ 0.25
CDC42BPB-201ENST00000361246 TCRAP04437 139 aa16.58■□□□□ 0.25
CDC42BPB-201ENST00000361246 IGKV1D-17A0A075B6S4 117 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 HOXA3O43365 443 aaPredicted RBP16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 CTAG1AP78358 180 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 MINOS1Q5TGZ0 78 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 NRGNQ92686 78 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 CHTOPQ9Y3Y2 248 aaKnown RBP16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 MINOS1-NBL1R4GNA1 71 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 TRBV9A0A0B4J1U6 114 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 TCF15Q12870 199 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 CD300EQ496F6 205 aaPredicted RBP16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 RNF166Q96A37 237 aaPredicted RBP16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 SPTBN1Q01082 2364 aaKnown RBP16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 LINC00271P0C7V0 271 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 GATD1Q8NB37 220 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 CSRP3P50461 194 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 FOXL1Q12952 345 aa16.58■□□□□ 0.24
CDC42BPB-201ENST00000361246 SPSB3Q6PJ21 355 aa16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 HEPN1Q6WQI6 88 aa16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 RHPN1-AS1Q9BWJ2 59 aa16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 DUX4L9Q6RFH8 374 aaPredicted RBP16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 RFNGQ9Y644 331 aa16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 EP300Q09472 2414 aaPredicted RBP16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 CDK2AP2O75956 126 aa16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 DKK1O94907 266 aa16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 PLXNA3P51805 1871 aa16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.57■□□□□ 0.24
CDC42BPB-201ENST00000361246 PAX2Q02962 417 aa16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 FAM169BQ8N8A8 192 aa16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 KLK9Q9UKQ9 250 aa16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 SRSF1Q07955 248 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 M0R1W7 72 aa16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 NR2C2APQ86WQ0 139 aa16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 DMRTC2Q8IXT2 367 aaPredicted RBP16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 INS-IGF2F8WCM5 200 aa16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 INSP01308 110 aa16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 SMIM6P0DI80 62 aa16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 C1orf159Q96HA4 380 aa16.56■□□□□ 0.24
CDC42BPB-201ENST00000361246 G3V318 75 aa16.55■□□□□ 0.24
CDC42BPB-201ENST00000361246 TRAV13-1A0A0B4J241 112 aa16.55■□□□□ 0.24
CDC42BPB-201ENST00000361246 PLXNA4Q9HCM2 1894 aa16.55■□□□□ 0.24
CDC42BPB-201ENST00000361246 B3GALT5-AS1P59052 145 aa16.55■□□□□ 0.24
CDC42BPB-201ENST00000361246 LBHQ53QV2 105 aaPredicted RBP16.55■□□□□ 0.24
CDC42BPB-201ENST00000361246 WFDC1Q9HC57 220 aa16.55■□□□□ 0.24
CDC42BPB-201ENST00000361246 ATP6V0E1O15342 81 aa16.54■□□□□ 0.24
CDC42BPB-201ENST00000361246 SSBP2P81877 361 aaPredicted RBP16.54■□□□□ 0.24
CDC42BPB-201ENST00000361246 GAS1P54826 345 aa16.54■□□□□ 0.24
CDC42BPB-201ENST00000361246 DOCK10Q96BY6 2186 aa16.54■□□□□ 0.24
CDC42BPB-201ENST00000361246 DAD1P61803 113 aa16.54■□□□□ 0.24
CDC42BPB-201ENST00000361246 PET117Q6UWS5 81 aa16.54■□□□□ 0.24
CDC42BPB-201ENST00000361246 LINC01619G3V211 115 aa16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 SRP19P09132 144 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 GRNP28799 593 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 SRSF3P84103 164 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 LCN12Q6JVE5 192 aa16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 KIAA1671Q9BY89 1806 aa16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 PARD6GQ9BYG4 376 aaPredicted RBP16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 CYSLTR1Q9Y271 337 aa16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 SPINK13Q1W4C9 94 aa16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 TNFRSF14Q92956 283 aa16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 LINC00473A8K010 186 aa16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 JPT2Q9H910 190 aa16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 SIGLEC9Q9Y336 463 aa16.53■□□□□ 0.24
CDC42BPB-201ENST00000361246 C14orf178Q8N769 122 aaPredicted RBP16.52■□□□□ 0.24
CDC42BPB-201ENST00000361246 PAX4O43316 350 aa16.52■□□□□ 0.24
CDC42BPB-201ENST00000361246 C10orf126Q8N4M7 172 aa16.52■□□□□ 0.24
CDC42BPB-201ENST00000361246 RPL23P62829 140 aaKnown RBP16.52■□□□□ 0.24
CDC42BPB-201ENST00000361246 HGFACQ04756 655 aa16.52■□□□□ 0.24
CDC42BPB-201ENST00000361246 FAM120AOSQ5T036 256 aa16.52■□□□□ 0.24
CDC42BPB-201ENST00000361246 MGST2Q99735 147 aa16.52■□□□□ 0.24
CDC42BPB-201ENST00000361246 SMKR1H3BMG3 65 aa16.52■□□□□ 0.23
CDC42BPB-201ENST00000361246 CCL1P22362 96 aa16.52■□□□□ 0.23
CDC42BPB-201ENST00000361246 TRAV12-2A0A075B6T6 113 aa16.52■□□□□ 0.23
CDC42BPB-201ENST00000361246 IGKV1-16P04430 117 aa16.51■□□□□ 0.23
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