RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 TRAV8-1A0A0A6YYK1 113 aa9.77□□□□□ -0.85
EPHB4-202ENST00000360620 SMIM27A0A1W2PRY6 76 aa9.77□□□□□ -0.85
EPHB4-202ENST00000360620 CD24P25063 80 aa9.77□□□□□ -0.85
EPHB4-202ENST00000360620 HIST1H1AQ02539 215 aaPredicted RBP9.77□□□□□ -0.85
EPHB4-202ENST00000360620 H3BUT2 72 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 P0C879 139 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 PSG1P11464 419 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 C11orf53Q8IXP5 236 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 SMIM12Q96EX1 92 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 ZNF414Q96IQ9 312 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 FNDC4Q9H6D8 234 aaPredicted RBP9.76□□□□□ -0.85
EPHB4-202ENST00000360620 C16orf97H3BN30 126 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 FAM27E3Q08E93 113 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 UFC1Q9Y3C8 167 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 SP9P0CG40 484 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 BRWD1-AS2P59051 145 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 C18orf15Q96N68 181 aa9.76□□□□□ -0.85
EPHB4-202ENST00000360620 CCL25O15444 150 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 IL4P05112 153 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 ASCL5Q7RTU5 278 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 ZNF329Q86UD4 541 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 CIARTQ8N365 385 aaPredicted RBP9.75□□□□□ -0.85
EPHB4-202ENST00000360620 TMEM116Q8NCL8 245 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 NAA38Q9BRA0 125 aaKnown RBP9.75□□□□□ -0.85
EPHB4-202ENST00000360620 TMUB1Q9BVT8 246 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 DSPP15924 2871 aaKnown RBP9.75□□□□□ -0.85
EPHB4-202ENST00000360620 LOC400499M0QZD8 3231 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 IGHV2-26A0A0B4J1V2 119 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 ESDP10768 282 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 FBXL15Q9H469 300 aa9.75□□□□□ -0.85
EPHB4-202ENST00000360620 TLN1Q9Y490 2541 aaKnown RBP9.75□□□□□ -0.85
EPHB4-202ENST00000360620 OR2T8A6NH00 312 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 TCRAP04437 139 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 PRB3Q04118 309 aaPredicted RBP9.74□□□□□ -0.85
EPHB4-202ENST00000360620 RBPJQ06330 500 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 TIMD4Q96H15 378 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 PLXNB1O43157 2135 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 CACNA1AO00555 2505 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 Q8TCH9 128 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 MEGF9Q9H1U4 602 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 ZNF71Q9NQZ8 489 aaPredicted RBP9.74□□□□□ -0.85
EPHB4-202ENST00000360620 S4R3C0 116 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 IGHV1-46P01743 117 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 LOXL3P58215 753 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 DUX4L9Q6RFH8 374 aaPredicted RBP9.74□□□□□ -0.85
EPHB4-202ENST00000360620 GFRALQ6UXV0 394 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 EXOC3-AS1Q8N2X6 119 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 TP53TG3Q9ULZ0 132 aa9.74□□□□□ -0.85
EPHB4-202ENST00000360620 CD40P25942 277 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 MEF2CQ06413 473 aaPredicted RBP9.73□□□□□ -0.85
EPHB4-202ENST00000360620 EBLN2Q6P2I7 272 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 RNASE8Q8TDE3 154 aaKnown RBP9.73□□□□□ -0.85
EPHB4-202ENST00000360620 MS4A6AQ9H2W1 248 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 OTORQ9NRC9 128 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 HCFC1P51610 2035 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 ZNF207O43670 478 aaKnown RBP9.73□□□□□ -0.85
EPHB4-202ENST00000360620 ZNF883P0CG24 379 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 BMI1P35226 326 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 CACNG7P62955 275 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 SLC25A48Q6ZT89 311 aaKnown RBP9.73□□□□□ -0.85
EPHB4-202ENST00000360620 TEX45Q8NA69 505 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 SPCS1Q9Y6A9 102 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 CLEC3BP05452 202 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 S100A4P26447 101 aaKnown RBP9.73□□□□□ -0.85
EPHB4-202ENST00000360620 FAM231DQ6ZW35 169 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 SLC25A2Q9BXI2 301 aa9.73□□□□□ -0.85
EPHB4-202ENST00000360620 GAGE12BA1L429 117 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 ITGB1BP1O14713 200 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 KLK10O43240 276 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 RIPPLY3P57055 190 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
EPHB4-202ENST00000360620 C17orf58Q2M2W7 97 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 SP5Q6BEB4 398 aaPredicted RBP9.72□□□□□ -0.85
EPHB4-202ENST00000360620 ORMDL3Q8N138 153 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 OR4A5Q8NH83 315 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 PLSCR4Q9NRQ2 329 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 SLC25A15Q9Y619 301 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 SRRM4A7MD48 611 aaKnown RBP9.72□□□□□ -0.85
EPHB4-202ENST00000360620 H0YJW9 148 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 TMEM167AQ8TBQ9 72 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 MAP1LC3AQ9H492 121 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 CST9LQ9H4G1 147 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 PROP1O75360 226 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 SEC11AP67812 179 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 OR5AN1Q8NGI8 311 aa9.72□□□□□ -0.85
EPHB4-202ENST00000360620 CEACAM3P40198 252 aa9.71□□□□□ -0.85
EPHB4-202ENST00000360620 OR2K2Q8NGT1 345 aa9.71□□□□□ -0.85
EPHB4-202ENST00000360620 IGHV3-35A0A0C4DH35 117 aa9.71□□□□□ -0.85
EPHB4-202ENST00000360620 CEACAM8P31997 349 aaPredicted RBP9.71□□□□□ -0.85
EPHB4-202ENST00000360620 GAFA1Q96PS6 74 aa9.71□□□□□ -0.85
EPHB4-202ENST00000360620 PSG8Q9UQ74 426 aa9.71□□□□□ -0.85
EPHB4-202ENST00000360620 OCIAD2Q56VL3 154 aa9.71□□□□□ -0.86
EPHB4-202ENST00000360620 Q6AWC8 147 aa9.71□□□□□ -0.86
EPHB4-202ENST00000360620 C8orf46Q8TAG6 207 aa9.71□□□□□ -0.86
EPHB4-202ENST00000360620 MYOZ3Q8TDC0 251 aa9.71□□□□□ -0.86
EPHB4-202ENST00000360620 IGHV1-24A0A0C4DH33 117 aa9.7□□□□□ -0.86
EPHB4-202ENST00000360620 MORN5Q5VZ52 161 aa9.7□□□□□ -0.86
EPHB4-202ENST00000360620 KIR3DL3Q8N743 410 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms