RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MMP23AO75900 390 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 IGHV2-5P01817 119 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 DLX1P56177 255 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 C17orf58Q2M2W7 97 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 SLC25A39Q9BZJ4 359 aaPredicted RBP13.29□□□□□ -0.28
SCAF1-201ENST00000360565 DENND4AQ7Z401 1863 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 IGHV3-11P01762 117 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 RHOGP84095 191 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 TRGV9Q99603 122 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 TCRAP04437 139 aa13.28□□□□□ -0.28
SCAF1-201ENST00000360565 NIT1Q86X76 327 aa13.28□□□□□ -0.28
SCAF1-201ENST00000360565 A0A1B0GWJ7 208 aa13.28□□□□□ -0.28
SCAF1-201ENST00000360565 SH2D7A6NKC9 451 aaPredicted RBP13.28□□□□□ -0.28
SCAF1-201ENST00000360565 A0A1W2PPI3 338 aa13.28□□□□□ -0.28
SCAF1-201ENST00000360565 PET117Q6UWS5 81 aa13.28□□□□□ -0.28
SCAF1-201ENST00000360565 FABP5P3A8MUU1 101 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 E7EQL1 145 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 COL8A2P25067 703 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 CFHR2P36980 270 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 GATA4P43694 442 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 ZNF664Q8N3J9 261 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 MED12LQ86YW9 2145 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 A0A1B0GW15 77 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 FNDC10F2Z333 226 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 KRTAP27-1Q3LI81 207 aa13.27□□□□□ -0.28
SCAF1-201ENST00000360565 PPIFP30405 207 aaKnown RBP13.27□□□□□ -0.29
SCAF1-201ENST00000360565 PSMB2P49721 201 aa13.27□□□□□ -0.29
SCAF1-201ENST00000360565 FAM74A4Q5TZK3 123 aa13.27□□□□□ -0.29
SCAF1-201ENST00000360565 C11orf53Q8IXP5 236 aa13.27□□□□□ -0.29
SCAF1-201ENST00000360565 DMRTA1Q5VZB9 504 aa13.27□□□□□ -0.29
SCAF1-201ENST00000360565 NUP35Q8NFH5 326 aa13.27□□□□□ -0.29
SCAF1-201ENST00000360565 BUB1B-PAK6H3BSN5 160 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 COTL1Q14019 142 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 PRR30Q53SZ7 412 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-201ENST00000360565 TMEM160Q9NX00 188 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 LINC00527Q9UJ94 153 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 FAM215AQ9Y5M1 114 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 TRAV9-2A0A087WT02 112 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 NPIPB5A8MRT5 1133 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 LY6DQ14210 128 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 LYRM7Q5U5X0 104 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 LCN12Q6JVE5 192 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 ZNF114Q8NC26 417 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 WT1P19544 449 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-201ENST00000360565 C1orf194Q5T5A4 169 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 OR1N2Q8NGR9 330 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 CCL19Q99731 98 aa13.26□□□□□ -0.29
SCAF1-201ENST00000360565 TRAV8-6A0A0B4J262 113 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 M0R3E3 92 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 TPTE2P1Q5T6R2 138 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 C7orf69Q9H7B7 122 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 A1L4Q6 167 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 ATP5L2Q7Z4Y8 100 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 FAM168AQ92567 244 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 FABP2P12104 132 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 FAM159AQ6UWV7 190 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 DNLZQ5SXM8 178 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 HIST1H4GQ99525 98 aa13.25□□□□□ -0.29
SCAF1-201ENST00000360565 IGLV3-9A0A075B6K5 115 aa13.24□□□□□ -0.29
SCAF1-201ENST00000360565 RPL15P61313 204 aaKnown RBP13.24□□□□□ -0.29
SCAF1-201ENST00000360565 C5orf64Q2M2E5 130 aa13.24□□□□□ -0.29
SCAF1-201ENST00000360565 ERASQ7Z444 233 aa13.24□□□□□ -0.29
SCAF1-201ENST00000360565 NDUFA4L2Q9NRX3 87 aa13.24□□□□□ -0.29
SCAF1-201ENST00000360565 TLN1Q9Y490 2541 aaKnown RBP13.23□□□□□ -0.29
SCAF1-201ENST00000360565 CEACAM8P31997 349 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-201ENST00000360565 IGFL3Q6UXB1 125 aa13.23□□□□□ -0.29
SCAF1-201ENST00000360565 NDUFS6O75380 124 aaKnown RBP13.23□□□□□ -0.29
SCAF1-201ENST00000360565 COX6B1P14854 86 aa13.23□□□□□ -0.29
SCAF1-201ENST00000360565 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-201ENST00000360565 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-201ENST00000360565 C3orf79P0CE67 100 aa13.23□□□□□ -0.29
SCAF1-201ENST00000360565 TMEM155Q4W5P6 130 aa13.23□□□□□ -0.29
SCAF1-201ENST00000360565 VMO1Q7Z5L0 202 aa13.23□□□□□ -0.29
SCAF1-201ENST00000360565 C15orf32Q32M92 178 aa13.22□□□□□ -0.29
SCAF1-201ENST00000360565 OR5AN1Q8NGI8 311 aa13.22□□□□□ -0.29
SCAF1-201ENST00000360565 RNF5Q99942 180 aa13.22□□□□□ -0.29
SCAF1-201ENST00000360565 SRRM4A7MD48 611 aaKnown RBP13.22□□□□□ -0.29
SCAF1-201ENST00000360565 SYT8Q8NBV8 401 aa13.22□□□□□ -0.29
SCAF1-201ENST00000360565 NCOR1P1Q9H4R4 102 aa13.22□□□□□ -0.29
SCAF1-201ENST00000360565 A0A1W2PNU3 283 aaPredicted RBP13.22□□□□□ -0.29
SCAF1-201ENST00000360565 Q8TCH9 128 aa13.22□□□□□ -0.29
SCAF1-201ENST00000360565 FOXC2Q99958 501 aa13.22□□□□□ -0.29
SCAF1-201ENST00000360565 GGTLC3B5MD39 225 aa13.22□□□□□ -0.29
SCAF1-201ENST00000360565 ASCL2Q99929 193 aa13.22□□□□□ -0.29
SCAF1-201ENST00000360565 WT1-ASQ06250 92 aa13.21□□□□□ -0.29
SCAF1-201ENST00000360565 SLC50A1Q9BRV3 221 aa13.21□□□□□ -0.29
SCAF1-201ENST00000360565 A0A0G2JLM5 398 aa13.21□□□□□ -0.29
SCAF1-201ENST00000360565 OR11H12B2RN74 326 aa13.21□□□□□ -0.29
SCAF1-201ENST00000360565 CNTFRP26992 372 aa13.21□□□□□ -0.29
SCAF1-201ENST00000360565 FAM71F2Q6NXP2 309 aa13.21□□□□□ -0.29
SCAF1-201ENST00000360565 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
SCAF1-201ENST00000360565 OR11H2Q8NH07 326 aa13.21□□□□□ -0.29
SCAF1-201ENST00000360565 TMEM131Q92545 1883 aa13.21□□□□□ -0.29
SCAF1-201ENST00000360565 LOC107984156A0A0G2JMH3 177 aa13.21□□□□□ -0.3
SCAF1-201ENST00000360565 ZNF329Q86UD4 541 aa13.21□□□□□ -0.3
SCAF1-201ENST00000360565 ARL17AQ8IVW1 177 aa13.21□□□□□ -0.3
SCAF1-201ENST00000360565 KIR2DL4Q99706 377 aa13.21□□□□□ -0.3
SCAF1-201ENST00000360565 TDGF1P13385 188 aa13.2□□□□□ -0.3
SCAF1-201ENST00000360565 LOXP28300 417 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-201ENST00000360565 ASIPP42127 132 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms