RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 IGKV1-27A0A075B6S5 117 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 PRCDQ00LT1 54 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 EXOC3-AS1Q8N2X6 119 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 ZNF48Q96MX3 618 aaPredicted RBP10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 ASCL2Q99929 193 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 FAM90A9PA6NNJ1 464 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 M0R2P5 195 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 SYS1-DBNDD2H3BUS1 97 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 PPBPP02775 128 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 SELLP14151 372 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 C3orf36Q3SXR2 165 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 NABP1Q96AH0 204 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 SEPSECSQ9HD40 501 aaKnown RBP10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 TRAV40A0A0B4J280 105 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 ZNF672Q499Z4 452 aaPredicted RBP10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 C9orf153Q5TBE3 101 aa10.05□□□□□ -0.8
CCDC144A-204ENST00000360524 FAM231BA6NCW3 169 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 WNT2P09544 360 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 Q0VFX4 171 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 TREML4Q6UXN2 200 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 TSSC4Q9Y5U2 329 aaPredicted RBP10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 TRAV3A0A0B4J244 114 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 RNF144BQ7Z419 303 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 GAS1P54826 345 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 C8orf46Q8TAG6 207 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 SPTA1P02549 2419 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 C5orf63A6NC05 138 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 GGTLC3B5MD39 225 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 KLRD1Q13241 179 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 ORMDL2Q53FV1 153 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 BMPERQ8N8U9 685 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 SPANXA1Q9NS26 97 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 DUSP14O95147 198 aaKnown RBP10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 GAGE1Q13065 139 aa10.04□□□□□ -0.8
CCDC144A-204ENST00000360524 CLPSP04118 112 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 ATP6V0BQ99437 205 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 DOCK4Q8N1I0 1966 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 EFNA4P52798 201 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 SRSF7Q16629 238 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 NSUN5P1Q3KNT7 163 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 SIGLEC15Q6ZMC9 328 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 ZNF581Q9P0T4 197 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 ICE1Q9Y2F5 2266 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 KLF17Q5JT82 389 aaPredicted RBP10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 AGMATQ9BSE5 352 aa10.03□□□□□ -0.8
CCDC144A-204ENST00000360524 IGHV2-26A0A0B4J1V2 119 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 SRRM5B3KS81 715 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 D6R8Y8 96 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 VMO1Q7Z5L0 202 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 TMEM219Q86XT9 240 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 SLX1AQ9BQ83 275 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 KLHDC3Q9BQ90 382 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 KLF12Q9Y4X4 402 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 PMS2P5A8MQ11 134 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 SUPT4H1P63272 117 aaKnown RBP10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 IGFL4Q6B9Z1 124 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 RASL11AQ6T310 242 aa10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 MRPL27Q9P0M9 148 aaKnown RBP10.02□□□□□ -0.8
CCDC144A-204ENST00000360524 LINC00205P59089 165 aa10.02□□□□□ -0.81
CCDC144A-204ENST00000360524 WDR83OSQ9Y284 106 aa10.02□□□□□ -0.81
CCDC144A-204ENST00000360524 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.81
CCDC144A-204ENST00000360524 MCRIP2Q9BUT9 160 aaKnown RBP10.02□□□□□ -0.81
CCDC144A-204ENST00000360524 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 MDS2Q8NDY4 140 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 GGTLC1Q9BX51 225 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 RPUSD1Q9UJJ7 312 aaKnown RBP10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 TRIOBPQ9H2D6 2365 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 A0A1B0GWJ7 208 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 TCRAP04437 139 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 GNLYP22749 145 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 TRAV41A0A0B4J266 112 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 TRGV4A0A0C4DH28 118 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 TMEM200BQ69YZ2 307 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 NDPQ00604 133 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 PAX8Q06710 450 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 LAGE3Q14657 143 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 ZNF474Q6S9Z5 364 aaPredicted RBP10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 C20orf204Q6ZNR8 217 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 SCN5AQ14524 2016 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 TMEM178BH3BS89 294 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 LILRA1O75019 489 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 LGALS1P09382 135 aaKnown RBP10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 FAM90A2PQ658T7 463 aa10.01□□□□□ -0.81
CCDC144A-204ENST00000360524 TMEM238C9JI98 176 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 IGHV1-8P0DP01 117 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 LINC01559Q495D7 138 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 RPP25LQ8N5L8 163 aaKnown RBP10□□□□□ -0.81
CCDC144A-204ENST00000360524 CD177Q8N6Q3 437 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 CHAC1Q9BUX1 264 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 A0A0G2JNJ9 132 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 ZNF415Q09FC8 603 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 LYZL1Q6UWQ5 148 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 RPRMLQ8N4K4 120 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 MBNL3Q9NUK0 354 aaKnown RBP10□□□□□ -0.81
CCDC144A-204ENST00000360524 Q9UFV3 132 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 SLC25A48Q6ZT89 311 aaKnown RBP10□□□□□ -0.81
CCDC144A-204ENST00000360524 ALPK2Q86TB3 2170 aa10□□□□□ -0.81
CCDC144A-204ENST00000360524 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms