RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ANAPC13Q9BS18 74 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 FBLN5Q9UBX5 448 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 ERG28Q9UKR5 140 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 CELA3BP08861 270 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 TIAF1O95411 115 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 H2BFSP57053 126 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 PSG8Q9UQ74 426 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 ZFAND6Q6FIF0 208 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 SPANXDQ9BXN6 97 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 PKIGQ9Y2B9 76 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 TRAV12-3A0A0B4J271 114 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 M0R1W7 72 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 A8MWV9 139 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 TMEM8BA6NDV4 472 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 ITGB1BP1O14713 200 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 ORAOV1Q8WV07 137 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 CHAC1Q9BUX1 264 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 E9PQ18 207 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 LEPROTO15243 131 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 TRBV6-7A0A0A0MS04 114 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 EFNA4P52798 201 aa8.04□□□□□ -1.12
CUX1-203ENST00000360264 ZFP36L1Q07352 338 aaKnown RBP8.04□□□□□ -1.12
CUX1-203ENST00000360264 C21orf62-AS1Q17RA5 79 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 LAMTOR2Q9Y2Q5 125 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 KLF12Q9Y4X4 402 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 ADAMTS7Q9UKP4 1686 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 VCYO14598 125 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 TNS1Q9HBL0 1735 aaKnown RBP8.03□□□□□ -1.12
CUX1-203ENST00000360264 CDKN1AP38936 164 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 A0A0G2JMM0 328 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 A0A1W2PPB8 328 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 A0A1W2PRS3 328 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 KIR3DP1A8MWS1 328 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 RPL32P62910 135 aaKnown RBP8.03□□□□□ -1.12
CUX1-203ENST00000360264 PSG7Q13046 419 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 ZNF525Q8N782 197 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 MCRIP2Q9BUT9 160 aaKnown RBP8.03□□□□□ -1.12
CUX1-203ENST00000360264 AMBPP02760 352 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 PRR32B1ATL7 298 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 TMEM170AQ8WVE7 144 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 NRXN2Q9P2S2 1712 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 ADAMTS9Q9P2N4 1935 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 NR2C2APQ86WQ0 139 aa8.03□□□□□ -1.12
CUX1-203ENST00000360264 EDA2RQ9HAV5 297 aa8.02□□□□□ -1.12
CUX1-203ENST00000360264 EFNB3Q15768 340 aa8.02□□□□□ -1.12
CUX1-203ENST00000360264 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.12
CUX1-203ENST00000360264 A8MXK9 166 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 NDUFS8O00217 210 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 GLMPQ8WWB7 406 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 GPHA2Q96T91 129 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 TRAV2A0A0B4J234 112 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 INAFM2P0DMQ5 153 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 LCN12Q6JVE5 192 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 CCL3L1P16619 93 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 SRP19P09132 144 aaKnown RBP8.02□□□□□ -1.13
CUX1-203ENST00000360264 DUTP33316 252 aaKnown RBP8.02□□□□□ -1.13
CUX1-203ENST00000360264 H3BMM0 161 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 ZNHIT1O43257 154 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 CT83Q5H943 113 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 FAM90A2PQ658T7 463 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 MRPL14Q6P1L8 145 aaKnown RBP8.02□□□□□ -1.13
CUX1-203ENST00000360264 PAX4O43316 350 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 C4orf51C9J302 202 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 GZMBP10144 247 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 HSD52Q0P140 79 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 C1QL2Q7Z5L3 287 aa8.02□□□□□ -1.13
CUX1-203ENST00000360264 MYMXA0A1B0GTQ4 84 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 TIMM23O14925 209 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 C5orf64Q2M2E5 130 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 ST6GALNAC3Q8NDV1 305 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 DLX4Q92988 240 aaPredicted RBP8.01□□□□□ -1.13
CUX1-203ENST00000360264 MPZP25189 248 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 SNHG12Q9BXW3 62 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 RMI2Q96E14 147 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 WDR90Q96KV7 1748 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 TRAV1-1A0A0B4J248 108 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 IFITM3Q01628 133 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 VMO1Q7Z5L0 202 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 ANAPC10Q9UM13 185 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 PLXNA2O75051 1894 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 ZNF562Q6V9R5 426 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 LYPD1Q8N2G4 141 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 C3orf56Q8N813 242 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 EREGO14944 169 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 HEPN1Q6WQI6 88 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 LINC00477Q96M19 166 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 A0A1B0GW64 132 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 A0A1B0GWJ7 208 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 TMEM178BH3BS89 294 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 LINC00614P0C842 121 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 PCP4P48539 62 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 SLC25A39Q9BZJ4 359 aaPredicted RBP8.01□□□□□ -1.13
CUX1-203ENST00000360264 IGHV1-8P0DP01 117 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 SRSF4Q08170 494 aaKnown RBP8.01□□□□□ -1.13
CUX1-203ENST00000360264 ZNF672Q499Z4 452 aaPredicted RBP8.01□□□□□ -1.13
CUX1-203ENST00000360264 C9orf139Q6ZV77 190 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 WBP1Q96G27 269 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 TMEM242Q9NWH2 141 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms