RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 SMIM12Q96EX1 92 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 CCL19Q99731 98 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 PIMREGQ9BSJ6 248 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 SLC25A39Q9BZJ4 359 aaPredicted RBP11.75□□□□□ -0.53
GABPB1-202ENST00000359031 TRAPPC1Q9Y5R8 145 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 F8P00451 2351 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 APCP25054 2843 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 SLC17A3O00476 420 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 HLA-DRB1P01911 266 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 S100A12P80511 92 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 RPL19P84098 196 aaKnown RBP11.75□□□□□ -0.53
GABPB1-202ENST00000359031 TMEM183BQ1AE95 376 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 C5orf17Q8NAS9 161 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 BLNKQ8WV28 456 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 AJUBAQ96IF1 538 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 FANCD2OSQ96PS1 177 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 THYN1Q9P016 225 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 MRPL27Q9P0M9 148 aaKnown RBP11.75□□□□□ -0.53
GABPB1-202ENST00000359031 EPDR1Q9UM22 224 aa11.75□□□□□ -0.53
GABPB1-202ENST00000359031 POLQO75417 2590 aa11.74□□□□□ -0.53
GABPB1-202ENST00000359031 NPFFO15130 113 aa11.74□□□□□ -0.53
GABPB1-202ENST00000359031 SLC25A5P05141 298 aaKnown RBP11.74□□□□□ -0.53
GABPB1-202ENST00000359031 SAA4P35542 130 aa11.74□□□□□ -0.53
GABPB1-202ENST00000359031 MFAP4P55083 255 aa11.74□□□□□ -0.53
GABPB1-202ENST00000359031 YPEL3P61236 119 aaPredicted RBP11.74□□□□□ -0.53
GABPB1-202ENST00000359031 RANP62826 216 aaKnown RBP11.74□□□□□ -0.53
GABPB1-202ENST00000359031 IBA57Q5T440 356 aaKnown RBP11.74□□□□□ -0.53
GABPB1-202ENST00000359031 GFI1BQ5VTD9 330 aa11.74□□□□□ -0.53
GABPB1-202ENST00000359031 S100A7AQ86SG5 101 aa11.74□□□□□ -0.53
GABPB1-202ENST00000359031 Q8N9W7 124 aa11.74□□□□□ -0.53
GABPB1-202ENST00000359031 GPR61Q9BZJ8 451 aa11.74□□□□□ -0.53
GABPB1-202ENST00000359031 IGHV7-81A0A0B4J1V7 117 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 XKRY2A2RUG3 117 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 H3BRN7 92 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 NDUFS8O00217 210 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 SCGB2A1O75556 95 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 HIST1H1EP10412 219 aaKnown RBP11.73□□□□□ -0.53
GABPB1-202ENST00000359031 MGST1P10620 155 aaKnown RBP11.73□□□□□ -0.53
GABPB1-202ENST00000359031 ZNF600Q6ZNG1 722 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 FAM231DQ6ZW35 169 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 TMEM68Q96MH6 324 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 ATG101Q9BSB4 218 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 SHANK2-AS3Q9BTD1 123 aa11.73□□□□□ -0.53
GABPB1-202ENST00000359031 TRBV9A0A0B4J1U6 114 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 PGPA6NDG6 321 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 PCP4L1A6NKN8 68 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 GNG7O60262 68 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 UBE2G1P62253 170 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 GNG5P63218 68 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 BAGE2Q86Y30 109 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 FAM168AQ92567 244 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 RNASE7Q9H1E1 156 aaKnown RBP11.72□□□□□ -0.53
GABPB1-202ENST00000359031 Q9H3A6 140 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 OTORQ9NRC9 128 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 KLF12Q9Y4X4 402 aa11.72□□□□□ -0.53
GABPB1-202ENST00000359031 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.53
GABPB1-202ENST00000359031 COX19Q49B96 90 aa11.71□□□□□ -0.53
GABPB1-202ENST00000359031 KLF17Q5JT82 389 aaPredicted RBP11.71□□□□□ -0.53
GABPB1-202ENST00000359031 LEMD1Q68G75 181 aa11.71□□□□□ -0.53
GABPB1-202ENST00000359031 ZNF491Q8N8L2 437 aa11.71□□□□□ -0.53
GABPB1-202ENST00000359031 FMC1Q96HJ9 113 aa11.71□□□□□ -0.53
GABPB1-202ENST00000359031 LINC00479Q96M42 142 aa11.71□□□□□ -0.53
GABPB1-202ENST00000359031 CHRDL1Q9BU40 450 aa11.71□□□□□ -0.53
GABPB1-202ENST00000359031 PAX8Q06710 450 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 KRTAP21-3Q3LHN1 58 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 FAM120AOSQ5T036 256 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 BPIFA4PQ86YQ2 179 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 OR8I2Q8N0Y5 310 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 OR10D4PQ8NGN7 298 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 C10orf105Q8TEF2 133 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 SPOCK3Q9BQ16 436 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 C21orf62Q9NYP8 219 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 CSMD2Q7Z408 3487 aa11.71□□□□□ -0.54
GABPB1-202ENST00000359031 DCHS2Q6V1P9 2916 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 PDZD2O15018 2839 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 SMIM27A0A1W2PRY6 76 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 VWC2LB2RUY7 222 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 IL4P05112 153 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 EGR2P11161 476 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-202ENST00000359031 FABP4P15090 132 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 FCGR2BP31994 310 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-202ENST00000359031 KLK9Q2XQG4 91 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 Q56UQ5 140 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 WDR73Q6P4I2 378 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 CLEC2AQ6UVW9 174 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 OR4F17Q8NGA8 305 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 FAM110DQ8TAY7 271 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-202ENST00000359031 TXN2Q99757 166 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 HIST1H2BLQ99880 126 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 NIT2Q9NQR4 276 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 ZNF586Q9NXT0 402 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 KLK9Q9UKQ9 250 aa11.7□□□□□ -0.54
GABPB1-202ENST00000359031 TRAV34A0A0B4J273 112 aa11.69□□□□□ -0.54
GABPB1-202ENST00000359031 CENPVL3A0A0U1RRI6 287 aa11.69□□□□□ -0.54
GABPB1-202ENST00000359031 ZNF705GA8MUZ8 300 aaPredicted RBP11.69□□□□□ -0.54
GABPB1-202ENST00000359031 F8W735 103 aaPredicted RBP11.69□□□□□ -0.54
GABPB1-202ENST00000359031 TCRAP04437 139 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms