RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 C9JQL5 133 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 BMPR1BO00238 502 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 OR2J3O76001 311 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 NDUFB8O95169 186 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 OR2C1O95371 312 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 S100A9P06702 114 aaKnown RBP8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 GATA2P23769 480 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 IER3P46695 156 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 CD81P60033 236 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 SLC35B1P78383 322 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 RHOGP84095 191 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 NDPQ00604 133 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 BTN1A1Q13410 526 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 LY6EQ16553 131 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 TIGITQ495A1 244 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 ASPHD1Q5U4P2 390 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 ZNF600Q6ZNG1 722 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 BPIFA4PQ86YQ2 179 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 TMEM86BQ8N661 226 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 OR4F17Q8NGA8 305 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 TMEM37Q8WXS4 190 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 RNF125Q96EQ8 232 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 PRSS22Q9GZN4 317 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 NPFFR1Q9GZQ6 430 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 CTDSP1Q9GZU7 261 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 TUBA4BQ9H853 241 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 DOK5Q9P104 306 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 VPREB3Q9UKI3 123 aa8.43□□□□□ -1.06
TRAPPC4-201ENST00000359005 MGAM2Q2M2H8 2515 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 IGHV3-21A0A0B4J1V1 117 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 PSMB11A5LHX3 300 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 FAM74A7A6NL05 159 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 FSHBP01225 129 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 IGHV3-48P01763 117 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 EGR2P11161 476 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 UBE2G2P60604 165 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 DEFB112Q30KQ8 113 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 C15orf32Q32M92 178 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 AWAT1Q58HT5 328 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 Q6YL49 198 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 BTF3L4Q96K17 158 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 GPR82Q96P67 336 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 TMEM242Q9NWH2 141 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 DMRT1Q9Y5R6 373 aa8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 SOX21Q9Y651 276 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC4-201ENST00000359005 C7orf77A4D0Y5 90 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 PPP1R2P9O14990 202 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 IGKV1-17P01599 117 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 TRGV3P03979 118 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 IL4P05112 153 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 MEOX2P50222 304 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 ZNF674Q2M3X9 581 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 FAM90A2PQ658T7 463 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 LYPD1Q8N2G4 141 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 ZNF502Q8TBZ5 544 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 HIST1H2BAQ96A08 127 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 SLC25A2Q9BXI2 301 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 SLC25A39Q9BZJ4 359 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 PRDM13Q9H4Q3 707 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 MRPL27Q9P0M9 148 aaKnown RBP8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 RABAC1Q9UI14 185 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 LY96Q9Y6Y9 160 aa8.41□□□□□ -1.06
TRAPPC4-201ENST00000359005 WI2-2373I1.2A0A1W2PRP0 233 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 K7EQM0 130 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 RPL7P18124 248 aaKnown RBP8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 SPATA31B1PQ5VZV4 182 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 PATE2Q6UY27 113 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 C11orf52Q96A22 123 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 ANAPC16Q96DE5 110 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 SHANK2-AS3Q9BTD1 123 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 PARLQ9H300 379 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 SDF2L1Q9HCN8 221 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 ESM1Q9NQ30 184 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 BIN3Q9NQY0 253 aa8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 MRPL36Q9P0J6 103 aaKnown RBP8.4□□□□□ -1.06
TRAPPC4-201ENST00000359005 HELTA6NFD8 242 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 OR2T8A6NH00 312 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 C9JCJ5 164 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 TGOLN2O43493 480 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 TCF21O43680 179 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 SCO1O75880 301 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 NBEAP1P0C6P0 100 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 S100PP25815 95 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 CNN1P51911 297 aaKnown RBP8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 TPPP2P59282 170 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 RPL19P84098 196 aaKnown RBP8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 PDE6HQ13956 83 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 C19orf35Q6ZS72 473 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 BCL6BQ8N143 479 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 ZNF491Q8N8L2 437 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 FAM167A-AS1Q96KT0 104 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 GNB4Q9HAV0 340 aa8.39□□□□□ -1.07
TRAPPC4-201ENST00000359005 CMYA5Q8N3K9 4069 aa8.38□□□□□ -1.07
TRAPPC4-201ENST00000359005 FBLL1A6NHQ2 334 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms