RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 HIGD1AQ9Y241 93 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 KLF12Q9Y4X4 402 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 ANKHD1Q8IWZ3 2542 aaKnown RBP6.85□□□□□ -1.31
RFX3-202ENST00000358730 TACC2O95359 2948 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 TCRAP04437 139 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 RPLP1P05386 114 aaKnown RBP6.85□□□□□ -1.31
RFX3-202ENST00000358730 RBPJQ06330 500 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 BATFQ16520 125 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 RNASEKQ6P5S7 137 aaKnown RBP6.85□□□□□ -1.31
RFX3-202ENST00000358730 ATP5L2Q7Z4Y8 100 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 MLST8Q9BVC4 326 aa6.85□□□□□ -1.31
RFX3-202ENST00000358730 PPIAL4CA0A0B4J2A2 164 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 VWC2LB2RUY7 222 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 TOX4O94842 621 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 TOMM40O96008 361 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 P01737 135 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 PPIAL4GP0DN37 164 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 PSG1P11464 419 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 LINC00322Q6ZN03 302 aaPredicted RBP6.84□□□□□ -1.31
RFX3-202ENST00000358730 SPTA1P02549 2419 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 ABCA4P78363 2273 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 A0A1B0GXF2 115 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 OR2J3O76001 311 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 LTAP01374 205 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 IGLC1P0CG04 106 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 CTRLP40313 264 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 PLP1P60201 277 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 HBBP68871 147 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 RASL11BQ9BPW5 248 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 ALKBH7Q9BT30 221 aaPredicted RBP6.84□□□□□ -1.31
RFX3-202ENST00000358730 WNT10AQ9GZT5 417 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 ONECUT1Q9UBC0 465 aa6.84□□□□□ -1.31
RFX3-202ENST00000358730 TRAV8-1A0A0A6YYK1 113 aa6.84□□□□□ -1.32
RFX3-202ENST00000358730 A8MWL6 223 aa6.84□□□□□ -1.32
RFX3-202ENST00000358730 M0R2Z0 102 aa6.84□□□□□ -1.32
RFX3-202ENST00000358730 RBP4P02753 201 aa6.84□□□□□ -1.32
RFX3-202ENST00000358730 KLF5Q13887 457 aaPredicted RBP6.84□□□□□ -1.32
RFX3-202ENST00000358730 ATOH7Q8N100 152 aa6.84□□□□□ -1.32
RFX3-202ENST00000358730 MUC15Q8N387 334 aa6.84□□□□□ -1.32
RFX3-202ENST00000358730 LINC01560Q8TB33 94 aa6.84□□□□□ -1.32
RFX3-202ENST00000358730 DAZAP1Q96EP5 407 aaKnown RBP6.84□□□□□ -1.32
RFX3-202ENST00000358730 A6NNC1 897 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 FAM90A27PA6NNH2 459 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 PAX2Q02962 417 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 Q86TA4 180 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 GTSF1Q8WW33 167 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 PGLYRP4Q96LB8 373 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 SLC25A39Q9BZJ4 359 aaPredicted RBP6.83□□□□□ -1.32
RFX3-202ENST00000358730 PTPRQQ9UMZ3 2332 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 FAM181BA6NEQ2 426 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 CNIH1O95406 144 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 ZNF25P17030 456 aaPredicted RBP6.83□□□□□ -1.32
RFX3-202ENST00000358730 MMDQ15546 238 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 CT83Q5H943 113 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 LCN12Q6JVE5 192 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 EXOC3-AS1Q8N2X6 119 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 VKORC1Q9BQB6 163 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 PRSS22Q9GZN4 317 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 OTORQ9NRC9 128 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 ZNF492Q9P255 531 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 LRBAP50851 2863 aa6.83□□□□□ -1.32
RFX3-202ENST00000358730 I3L2K1 104 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 TIMM23O14925 209 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 FOXC1Q12948 553 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 GOLT1AQ6ZVE7 132 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 COL8A1P27658 744 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 FOXA3P55318 350 aaPredicted RBP6.82□□□□□ -1.32
RFX3-202ENST00000358730 PRNTQ86SH4 94 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 CIARTQ8N365 385 aaPredicted RBP6.82□□□□□ -1.32
RFX3-202ENST00000358730 OR8B3Q8NGG8 313 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 OR8B2Q96RD0 313 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 TXN2Q99757 166 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 UQCR10Q9UDW1 63 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 SOX21Q9Y651 276 aaPredicted RBP6.82□□□□□ -1.32
RFX3-202ENST00000358730 ARHGAP32A7KAX9 2087 aa6.82□□□□□ -1.32
RFX3-202ENST00000358730 IGKV1-17P01599 117 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 IGLC2P0DOY2 106 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 IGLC3P0DOY3 106 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 CD24P25063 80 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 GRNP28799 593 aaKnown RBP6.81□□□□□ -1.32
RFX3-202ENST00000358730 ZNF672Q499Z4 452 aaPredicted RBP6.81□□□□□ -1.32
RFX3-202ENST00000358730 Q56UQ5 140 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 Q6ZN92 141 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 RBPMS2Q6ZRY4 209 aaKnown RBP6.81□□□□□ -1.32
RFX3-202ENST00000358730 RBM14Q96PK6 669 aaKnown RBP6.81□□□□□ -1.32
RFX3-202ENST00000358730 TMEM14CQ9P0S9 112 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 DCHS2Q6V1P9 2916 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 M0QZ24 198 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 BTF3P20290 206 aaKnown RBP6.81□□□□□ -1.32
RFX3-202ENST00000358730 NBL1P41271 181 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 HNRNPA3P51991 378 aaKnown RBP6.81□□□□□ -1.32
RFX3-202ENST00000358730 ZNF124Q15973 351 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 MAJINQ3KP22 176 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 LDLRAD2Q5SZI1 272 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 EBLN2Q6P2I7 272 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 Q71RC1 249 aaPredicted RBP6.81□□□□□ -1.32
RFX3-202ENST00000358730 LPAR2Q9HBW0 351 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 LY6LH3BQJ8 138 aa6.81□□□□□ -1.32
RFX3-202ENST00000358730 K7EIM0 57 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms