RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 DEFB105AQ8NG35 78 aa7.28□□□□□ -1.24
CTNND1-201ENST00000358694 IGKV2D-24A0A075B6R9 120 aa7.28□□□□□ -1.24
CTNND1-201ENST00000358694 IGKV1OR2-108A0A075B7D4 117 aa7.28□□□□□ -1.24
CTNND1-201ENST00000358694 MAPK1IP1LQ8NDC0 245 aa7.28□□□□□ -1.24
CTNND1-201ENST00000358694 Q96MF0 132 aa7.28□□□□□ -1.24
CTNND1-201ENST00000358694 PKD1L3Q7Z443 1732 aa7.28□□□□□ -1.24
CTNND1-201ENST00000358694 AMBPP02760 352 aa7.28□□□□□ -1.24
CTNND1-201ENST00000358694 IGFBP3P17936 291 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-201ENST00000358694 C5orf64Q2M2E5 130 aa7.28□□□□□ -1.24
CTNND1-201ENST00000358694 RPUSD1Q9UJJ7 312 aaKnown RBP7.28□□□□□ -1.24
CTNND1-201ENST00000358694 TRPM3Q9HCF6 1732 aaPredicted RBP7.27□□□□□ -1.24
CTNND1-201ENST00000358694 MAST2Q6P0Q8 1798 aa7.27□□□□□ -1.24
CTNND1-201ENST00000358694 FOXF2Q12947 444 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 M0R1W7 72 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 TBX6O95947 436 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-201ENST00000358694 CT83Q5H943 113 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 ATG2BQ96BY7 2078 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 IGKV1-5P01602 117 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 SELLP14151 372 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 PSG3Q16557 428 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 MST1LQ2TV78 715 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 CD200R1LQ6Q8B3 271 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 MDC1Q14676 2089 aaKnown RBP7.27□□□□□ -1.25
CTNND1-201ENST00000358694 NRAPQ86VF7 1730 aa7.27□□□□□ -1.25
CTNND1-201ENST00000358694 TMEM178BH3BS89 294 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 FOXG1P55316 489 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-201ENST00000358694 IFITM3Q01628 133 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 CARHSP1Q9Y2V2 147 aaKnown RBP7.26□□□□□ -1.25
CTNND1-201ENST00000358694 ZNF646O15015 1829 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-201ENST00000358694 EGR2P11161 476 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-201ENST00000358694 RNF5Q99942 180 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 BPESC1Q9GZL8 116 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 CCDC88CQ9P219 2028 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 SMKR1H3BMG3 65 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 ANGP03950 147 aaKnown RBP7.26□□□□□ -1.25
CTNND1-201ENST00000358694 TIMP3P35625 211 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 TMEM258P61165 79 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 KLK9Q9UKQ9 250 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 NEUROG3Q9Y4Z2 214 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 RFNGQ9Y644 331 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 ERVH48-1M5A8F1 160 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 SPATA31B1PQ5VZV4 182 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 RUSC1-AS1Q66K80 236 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 TGFBR3LH3BV60 316 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 C4orf48Q5BLP8 95 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 NEGR1Q7Z3B1 354 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 MRPL52Q86TS9 123 aaKnown RBP7.26□□□□□ -1.25
CTNND1-201ENST00000358694 IGF2BP2-AS1Q96M15 143 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 TMEM243Q9BU79 118 aa7.26□□□□□ -1.25
CTNND1-201ENST00000358694 RHODO00212 210 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 IL18BPO95998 194 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 SPINK13Q1W4C9 94 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 CLPSL2Q6UWE3 100 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 RPRMLQ8N4K4 120 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 TRGV9Q99603 122 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 ZNF831Q5JPB2 1677 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 BUB1B-PAK6H3BSN5 160 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 IGHG4P01861 327 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 NBL1P41271 181 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 TCF15Q12870 199 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 Q9HAA7 133 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 ZNFX1Q9P2E3 1918 aaKnown RBP7.25□□□□□ -1.25
CTNND1-201ENST00000358694 hDV102S1A0JD36 115 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 PRB1P04280 392 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 SPINK8P0C7L1 97 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 SAA4P35542 130 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 TREML4Q6UXN2 200 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 HEPN1Q6WQI6 88 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 IGHV3-38A0A0C4DH36 116 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 ZNRF2Q8NHG8 242 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 TMEM190Q8WZ59 177 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 TIMM17AQ99595 171 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 PLSCR4Q9NRQ2 329 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 BAALCQ8WXS3 180 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 PLCH1Q4KWH8 1693 aa7.25□□□□□ -1.25
CTNND1-201ENST00000358694 A6NNC1 897 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 PKIGQ9Y2B9 76 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 A0A087X0K7 114 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 MSMBP08118 114 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 GAS1P54826 345 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 ZC2HC1BQ5TFG8 222 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 MRPL14Q6P1L8 145 aaKnown RBP7.24□□□□□ -1.25
CTNND1-201ENST00000358694 GTSF1LQ9H1H1 148 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 RPL18AQ02543 176 aaKnown RBP7.24□□□□□ -1.25
CTNND1-201ENST00000358694 IL17RELQ6ZVW7 336 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 NABP1Q96AH0 204 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 WDR83OSQ9Y284 106 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 TP53TG1Q9Y2A0 90 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 I3L3M4 83 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 J3QKU1 62 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 VSIRQ9H7M9 311 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 PINLYPA6NC86 204 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 ARMS2P0C7Q2 107 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 CITED1Q99966 193 aa7.24□□□□□ -1.25
CTNND1-201ENST00000358694 CRYGCP07315 174 aa7.23□□□□□ -1.25
CTNND1-201ENST00000358694 A0A0G2JNJ9 132 aa7.23□□□□□ -1.25
CTNND1-201ENST00000358694 A0A1W2PPI3 338 aa7.23□□□□□ -1.25
CTNND1-201ENST00000358694 TMEM242Q9NWH2 141 aa7.23□□□□□ -1.25
CTNND1-201ENST00000358694 Q9UFV3 132 aa7.23□□□□□ -1.25
CTNND1-201ENST00000358694 BTAF1O14981 1849 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms