RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 TMEM167AQ8TBQ9 72 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 VEGFBP49765 207 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 TMEM101Q96IK0 257 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 PRDM6Q9NQX0 595 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 CEP350Q5VT06 3117 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 EVI2AP22794 236 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 OR10J6PQ8NGY7 276 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 IGHV3-15A0A0B4J1V0 119 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 A0A1W2PR80 420 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 GAGE12JA6NER3 117 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 RRHO14718 337 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 GAGE7O76087 117 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 GAGE12FP0CL80 117 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 GAGE12GP0CL81 117 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 GAGE12IP0CL82 117 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 GAGE4Q13068 117 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 ANOS1P23352 680 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 RTP5Q14D33 572 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 VCYO14598 125 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 IGLL1P15814 213 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 SSTR5P35346 364 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 THAP8Q8NA92 274 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 GTSF1LQ9H1H1 148 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 WDR90Q96KV7 1748 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 SPINK4O60575 86 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 Q6Q795 121 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 ERG28Q9UKR5 140 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 KIAA1549Q9HCM3 1950 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 IGHG4P01861 327 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 MDKP21741 143 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-204ENST00000358025 OR13A1Q8NGR1 328 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 IGKV3-7A0A075B6H7 116 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 M0R2P5 195 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 PCOLCEQ15113 449 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 DTX1Q86Y01 620 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 NRTNQ99748 197 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 FCGR2BP31994 310 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-204ENST00000358025 GFRA1P56159 465 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 SSBP2P81877 361 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-204ENST00000358025 CTRLP40313 264 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 DNAJC30Q96LL9 226 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 PLA2G2FQ9BZM2 168 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 FAM106CPP0CH98 169 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 IFITM1P13164 125 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 TFPI2P48307 235 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 ZNF493Q6ZR52 646 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 LINC00477Q96M19 166 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 DPM3Q9P2X0 92 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 COX6A1P12074 109 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 IGFBP2P18065 325 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 FOXC1Q12948 553 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 MINOS1Q5TGZ0 78 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 LINC00311Q8N616 119 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 MINOS1-NBL1R4GNA1 71 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 DKK1O94907 266 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 SRXN1Q9BYN0 137 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 MUC21A0A0G2JKD1 596 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 MUC21A0A140T8X8 626 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 MUC21Q5SSG8 566 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 TMEM75Q8N9X5 138 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 ZDHHC16Q969W1 377 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 COL4A5P29400 1685 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 C16orf97H3BN30 126 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 IL17RELQ6ZVW7 336 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 PLA2G3Q9NZ20 509 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 LTAP01374 205 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 ATXN8Q156A1 80 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 ZNF114Q8NC26 417 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 PLAURQ03405 335 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 TFF3Q07654 80 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 FOXF2Q12947 444 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 GATD1Q8NB37 220 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 NKX2-8O15522 239 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 KIAA1644Q3SXP7 199 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 MED19A0JLT2 244 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-204ENST00000358025 LGALS3P17931 250 aaKnown RBP3.37□□□□□ -1.87
SYNE2-204ENST00000358025 ZNF576Q9H609 170 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 OR11H6Q8NGC7 330 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 PRSS22Q9GZN4 317 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 EFNA2O43921 213 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 PSG7Q13046 419 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 STPG1Q5TH74 334 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 WNT9BO14905 357 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 CELA2BP08218 269 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-204ENST00000358025 TMUB1Q9BVT8 246 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 GEMIN7Q9H840 131 aaKnown RBP3.37□□□□□ -1.87
SYNE2-204ENST00000358025 C16orf47Q6ZP98 133 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-204ENST00000358025 IGFBPL1Q8WX77 278 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 TRBV20OR9-2A0A075B6H5 130 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 GTSF1Q8WW33 167 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 SRRM5B3KS81 715 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 HES3Q5TGS1 186 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 KIR3DL3Q8N743 410 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 SCRT2Q9NQ03 307 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 TCRAP04437 139 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 LOC105371242A0A075B767 164 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 PPIAL4CA0A0B4J2A2 164 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 PPIAL4GP0DN37 164 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 CRYBA4P53673 196 aa3.37□□□□□ -1.87
SYNE2-204ENST00000358025 DMRTC2Q8IXT2 367 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms