RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 KIR2DL2P43627 348 aaPredicted RBP8.15□□□□□ -1.11
RNF40-202ENST00000357890 HCP5Q6MZN7 132 aa8.15□□□□□ -1.11
RNF40-202ENST00000357890 K7EMI3 77 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 SUB1P53999 127 aaKnown RBP eCLIP8.14□□□□□ -1.11
RNF40-202ENST00000357890 GOLT1AQ6ZVE7 132 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 Q8N976 141 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 OR5A1Q8NGJ0 315 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 ZNF418Q8TF45 676 aaPredicted RBP8.14□□□□□ -1.11
RNF40-202ENST00000357890 NCKAP5O14513 1909 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 SAA2-SAA4A0A096LPE2 208 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 C9orf118A6NHY6 69 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 H0YJW9 148 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 IGKV3-15P01624 115 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 SAA2P0DJI9 122 aaPredicted RBP8.14□□□□□ -1.11
RNF40-202ENST00000357890 SCGB1C2P0DMR2 95 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 CHODLQ9H9P2 273 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 RNF7Q9UBF6 113 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 KBTBD11-OT1A0A1B0GTJ5 212 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 RBP4P02753 201 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 C16orf54Q6UWD8 224 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 BCL6BQ8N143 479 aaPredicted RBP8.14□□□□□ -1.11
RNF40-202ENST00000357890 HIST1H4GQ99525 98 aa8.14□□□□□ -1.11
RNF40-202ENST00000357890 PMS2P5A8MQ11 134 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 K7EP34 96 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 K7ERJ3 54 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 CEACAM3P40198 252 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 LINC00305Q7Z4B0 112 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 OR4F17Q8NGA8 305 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 CCL17Q92583 94 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 ATP6V0BQ99437 205 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 HIF1ANQ9NWT6 349 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 TRAV8-1A0A0A6YYK1 113 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 C15orf61A6NNL5 157 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 VSTM5A8MXK1 200 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 IGHG3P01860 377 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 SRSF8Q9BRL6 282 aaKnown RBP8.13□□□□□ -1.11
RNF40-202ENST00000357890 MS4A6AQ9H2W1 248 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 TNRC6AQ8NDV7 1962 aaKnown RBP8.13□□□□□ -1.11
RNF40-202ENST00000357890 IGKV1D-17A0A075B6S4 117 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 SPAARA0A1B0GVQ0 90 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 BRWD1-AS2P59051 145 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 FAM216BQ8N7L0 139 aa8.13□□□□□ -1.11
RNF40-202ENST00000357890 CREBBPQ92793 2442 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 FTH1P19P0C7X4 201 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 CKS2P33552 79 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 IGHV1-18A0A0C4DH31 117 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 ZNF134P52741 427 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 AMTNQ6UX39 209 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 RBPMS2Q6ZRY4 209 aaKnown RBP8.12□□□□□ -1.11
RNF40-202ENST00000357890 GCSAMQ8N6F7 178 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 LY96Q9Y6Y9 160 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 C11orf53Q8IXP5 236 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 CHCHD1Q96BP2 118 aaKnown RBP8.12□□□□□ -1.11
RNF40-202ENST00000357890 DYNLRB1Q9NP97 96 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 TMEM160Q9NX00 188 aa8.12□□□□□ -1.11
RNF40-202ENST00000357890 TRAV26-1A0A087WT03 109 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 GAGE12HA6NDE8 117 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 SRRM5B3KS81 715 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
RNF40-202ENST00000357890 RHOGP84095 191 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 MBNL2Q5VZF2 373 aaKnown RBP8.11□□□□□ -1.11
RNF40-202ENST00000357890 SH2D6Q7Z4S9 175 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 FAM90A1Q86YD7 464 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 FAM222BQ8WU58 562 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 GPR82Q96P67 336 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 GEMIN7Q9H840 131 aaKnown RBP8.11□□□□□ -1.11
RNF40-202ENST00000357890 SMIM27A0A1W2PRY6 76 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 C2orf70A6NJV1 201 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 FAM90A9PA6NNJ1 464 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 OR1L8Q8NGR8 309 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 PLSCR4Q9NRQ2 329 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 IGHV3-72A0A0B4J1Y9 119 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 A0A1B0GUT8 65 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 G3V4G9 280 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 KLK10O43240 276 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 CNIH1O95406 144 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 NBEAP1P0C6P0 100 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 NBL1P41271 181 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 SCGB1D4Q6XE38 83 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 CIARTQ8N365 385 aaPredicted RBP8.11□□□□□ -1.11
RNF40-202ENST00000357890 IFI27L2Q9H2X8 130 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 ZNRD1Q9P1U0 126 aa8.11□□□□□ -1.11
RNF40-202ENST00000357890 H3BRM9 83 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 COX8AP10176 69 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 VDAC2P45880 294 aaPredicted RBP8.1□□□□□ -1.11
RNF40-202ENST00000357890 SPATA12Q7Z6I5 190 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 ARPC1AQ92747 370 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 ZNF479Q96JC4 524 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 ZFHX2Q9C0A1 2572 aaPredicted RBP8.1□□□□□ -1.11
RNF40-202ENST00000357890 PIEZO2Q9H5I5 2752 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 A0A1W2PPM0 123 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 C15orf65H3BRN8 121 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 GLRXP35754 106 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 SRSF9Q13242 221 aaKnown RBP eCLIP8.1□□□□□ -1.11
RNF40-202ENST00000357890 SRSF6Q13247 344 aaKnown RBP8.1□□□□□ -1.11
RNF40-202ENST00000357890 SP5Q6BEB4 398 aaPredicted RBP8.1□□□□□ -1.11
RNF40-202ENST00000357890 ZCCHC24Q8N2G6 241 aaKnown RBP8.1□□□□□ -1.11
RNF40-202ENST00000357890 PRSS33Q8NF86 280 aa8.1□□□□□ -1.11
RNF40-202ENST00000357890 ZNF71Q9NQZ8 489 aaPredicted RBP8.1□□□□□ -1.11
RNF40-202ENST00000357890 SLC25A10Q9UBX3 287 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms