RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 ZNF493Q6ZR52 646 aa3.89□□□□□ -1.79
SYNE2-203ENST00000357395 LRP5O75197 1615 aa3.89□□□□□ -1.79
SYNE2-203ENST00000357395 ZNF137PP52743 207 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 RFNGQ9Y644 331 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TRBV6-1A0A0K0K1D8 114 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TMEM202A6NGA9 273 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 C9JAW5 83 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 Q9H3A6 140 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 ORMDL1Q9P0S3 153 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 LINC00312Q9Y6C7 94 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 KMT2EQ8IZD2 1858 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 CD28P10747 220 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 CCL3L1P16619 93 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TICRRQ7Z2Z1 1910 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 CEACAM8P31997 349 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-203ENST00000357395 HIST1H4AP62805 103 aaKnown RBP3.88□□□□□ -1.79
SYNE2-203ENST00000357395 C8orf86Q6ZUL3 223 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 CCL28Q9NRJ3 127 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 SMIM10L1P0DMW3 83 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 SRSF3P84103 164 aaKnown RBP3.88□□□□□ -1.79
SYNE2-203ENST00000357395 SMIM10Q96HG1 83 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 QSER1Q2KHR3 1735 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TMEM229AB2RXF0 380 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 PPIHO43447 177 aaKnown RBP3.88□□□□□ -1.79
SYNE2-203ENST00000357395 CD3EP07766 207 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 NANOS3P60323 173 aaKnown RBP3.88□□□□□ -1.79
SYNE2-203ENST00000357395 C3orf22Q8N5N4 141 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 GFERP55789 205 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 SP5Q6BEB4 398 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TRBV7-1A0A0A6YYK4 115 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 FOXA3P55318 350 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-203ENST00000357395 AMTNQ6UX39 209 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 PILRAQ9UKJ1 303 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TRBV10-2A0A0K0K1G8 114 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 FUSP35637 526 aaKnown RBP eCLIP3.88□□□□□ -1.79
SYNE2-203ENST00000357395 Q8N8P6 123 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 IDI2-AS1Q9NZ38 188 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TRGV5A0A0B4J1U4 118 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 EREGO14944 169 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TMEM54Q969K7 222 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 USMG5Q96IX5 58 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TECTAO75443 2155 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 LIFP15018 202 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 MGPP08493 103 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 CD69Q07108 199 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 SH2D6Q7Z4S9 175 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 ALKBH6Q3KRA9 238 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 FAM219BQ5XKK7 198 aa3.88□□□□□ -1.79
SYNE2-203ENST00000357395 TMEM256-PLSCR3K7ERE1 68 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 HERVK_113P63121 156 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 TMEM256Q8N2U0 113 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 DAND5Q8N907 189 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 CALYQ9NYX4 217 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 EIF4EBP3O60516 100 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 REPIN1Q9BWE0 567 aaKnown RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 TM2D2Q9BX73 214 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 C21orf62Q9NYP8 219 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 B5MCH6 92 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 D6R8Y8 96 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 PIN1P1O15428 100 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 LINC01590Q5TEZ4 76 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 RICTORQ6R327 1708 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 P0DMU3 169 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 FAM231AP0DMU4 169 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 FAM231CP0DMU5 169 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 RPS27P42677 84 aaKnown RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 IGHG3P01860 377 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 TFPI2P48307 235 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 VWC2Q2TAL6 325 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 SUPT4H1P63272 117 aaKnown RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 C1orf61Q13536 156 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 ZNF497Q6ZNH5 498 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 SMIM2Q9BVW6 85 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 NWD2Q9ULI1 1742 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 DDX60LQ5H9U9 1706 aaKnown RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 PIGYQ3MUY2 71 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 NXPH1P58417 271 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 CXCL1P09341 107 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 ZAR1Q86SH2 424 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 NDUFA3O95167 84 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 PRR13Q9NZ81 148 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 COL11A1P12107 1806 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 SPTY2D1-AS1A0A0U1RR47 76 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 ZNF474Q6S9Z5 364 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 C8orf44Q96CB5 159 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 C6orf106Q9H6K1 298 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 FOXI1Q12951 378 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 CBLN3Q6UW01 205 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 OCC1Q8TAD7 63 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 PSG8Q9UQ74 426 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 PHIPQ8WWQ0 1821 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 SHISA7A6NL88 538 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 ZC2HC1BQ5TFG8 222 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 NRACQ8N912 160 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 LINC00477Q96M19 166 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 PTPN13Q12923 2485 aa3.87□□□□□ -1.79
SYNE2-203ENST00000357395 ZFP36L2P47974 494 aaKnown RBP3.87□□□□□ -1.79
SYNE2-203ENST00000357395 DEFB110Q30KQ9 67 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms