RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 LINC00527Q9UJ94 153 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 PSPNO60542 156 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 CGB7P0DN87 165 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 RPL15P61313 204 aaKnown RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 DLX4Q92988 240 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 CHCHD1Q96BP2 118 aaKnown RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 TMEM178BH3BS89 294 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 GZMBP10144 247 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 KLRD1Q13241 179 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 SLC25A48Q6ZT89 311 aaKnown RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 C1QL2Q7Z5L3 287 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 SLC25A39Q9BZJ4 359 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 ZMAT4Q9H898 229 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 ORAOV1Q8WV07 137 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 IGHV3-64A0A075B6Q5 118 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 RAMP3O60896 148 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 CCL1P22362 96 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 CCL20P78556 96 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 RNF223E7ERA6 249 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 F5H768 121 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 SNAI2O43623 268 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 PYYP10082 97 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 DUTP33316 252 aaKnown RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 C6orf226Q5I0X4 101 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 IGKV2-40A0A087WW87 121 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 IGKV2D-40P01614 121 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 SRSF3P84103 164 aaKnown RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 TMEM155Q4W5P6 130 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 WDR90Q96KV7 1748 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 A0A0G2JNJ9 132 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 RIPPLY3P57055 190 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 C5orf64Q2M2E5 130 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 TMEM200BQ69YZ2 307 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 LINC00477Q96M19 166 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 RTBDNQ9BSG5 229 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-202ENST00000356435 Q9UFV3 132 aa4.56□□□□□ -1.68
PTPRD-202ENST00000356435 EVI2AP22794 236 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 HGFACQ04756 655 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 RBMY1FQ15415 496 aaKnown RBP4.55□□□□□ -1.68
PTPRD-202ENST00000356435 COQ2Q96H96 371 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 MYMXA0A1B0GTQ4 84 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 J3QLI3 93 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 TSKUQ8WUA8 353 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 TRGV9Q99603 122 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 RPUSD1Q9UJJ7 312 aaKnown RBP4.55□□□□□ -1.68
PTPRD-202ENST00000356435 SUPT4H1P63272 117 aaKnown RBP4.55□□□□□ -1.68
PTPRD-202ENST00000356435 GAGE2EQ4V326 116 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 C1orf159Q96HA4 380 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 TMEM126AQ9H061 195 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 OSTCQ9NRP0 149 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 GAGE2DQ9UEU5 116 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 PATJQ8NI35 1801 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 IGKV1D-43A0A0B4J1Z2 117 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 ZNF138P52744 262 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 FOXF2Q12947 444 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 Q96MF0 132 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 TP53BP1Q12888 1972 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-202ENST00000356435 SRRM5B3KS81 715 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 C22orf46C9J442 243 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 MLNRO43193 412 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 MSMBP08118 114 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 ST6GALNAC6Q969X2 333 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 LSM4Q9Y4Z0 139 aaKnown RBP4.55□□□□□ -1.68
PTPRD-202ENST00000356435 PINLYPA6NC86 204 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 TGFBR3LH3BV60 316 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 FXYD7P58549 80 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 CD300EQ496F6 205 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-202ENST00000356435 ZNF876PQ49A33 203 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 ZNF562Q6V9R5 426 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 NHP2Q9NX24 153 aaKnown RBP4.55□□□□□ -1.68
PTPRD-202ENST00000356435 TNFRSF6BO95407 300 aa4.55□□□□□ -1.68
PTPRD-202ENST00000356435 SRP19P09132 144 aaKnown RBP4.55□□□□□ -1.68
PTPRD-202ENST00000356435 A6NNC1 897 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 FCN3O75636 299 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 ZNF837Q96EG3 531 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-202ENST00000356435 RHPN1-AS1Q9BWJ2 59 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 RNASE7Q9H1E1 156 aaKnown RBP4.54□□□□□ -1.68
PTPRD-202ENST00000356435 RALGAPA1Q6GYQ0 2036 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 LCTP09848 1927 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 SEC16AO15027 2179 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 A0A0U1RRA0 63 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 A8MWP6 167 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 BUB1B-PAK6H3BSN5 160 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 VCYO14598 125 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 ZCCHC24Q8N2G6 241 aaKnown RBP4.54□□□□□ -1.68
PTPRD-202ENST00000356435 HIST1H2BLQ99880 126 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 H3BUT2 72 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 ITGB1BP1O14713 200 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 DNAJC30Q96LL9 226 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 SNHG12Q9BXW3 62 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 ERG28Q9UKR5 140 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 A8MWV9 139 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 Q0VFX4 171 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 DMRTA1Q5VZB9 504 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 NYNRINQ9P2P1 1898 aaKnown RBP4.54□□□□□ -1.68
PTPRD-202ENST00000356435 UBE2E2Q96LR5 201 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 MGST2Q99735 147 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 DERL1Q9BUN8 251 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 AHCTF1Q8WYP5 2266 aa4.54□□□□□ -1.68
PTPRD-202ENST00000356435 NDPQ00604 133 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms