RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SNHG12Q9BXW3 62 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 LINC00614P0C842 121 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 PLP1P60201 277 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 H3BUX3 64 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 DKK1O94907 266 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 CMC4P56277 68 aaPredicted RBP10.04□□□□□ -0.8
COLCA1-201ENST00000355430 TIMM23O14925 209 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 IGKV3-15P01624 115 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 GPX1P07203 203 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 COL8A2P25067 703 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 GPR183P32249 361 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 Q6ZSR3 168 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 NUP35Q8NFH5 326 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 DIDO1Q9BTC0 2240 aaKnown RBP10.03□□□□□ -0.8
COLCA1-201ENST00000355430 ERVK11-1P61568 191 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 CR1LQ2VPA4 569 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 BRD3OSQ6XYD6 125 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 IGHV2-26A0A0B4J1V2 119 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 TYMSP04818 313 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 FBLN7Q53RD9 439 aa10.03□□□□□ -0.8
COLCA1-201ENST00000355430 WT1P19544 449 aaPredicted RBP10.02□□□□□ -0.81
COLCA1-201ENST00000355430 LMO1P25800 156 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 HERVK_113P61574 105 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 LINC00479Q96M42 142 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 IGHV3OR16-13A0A075B7E8 117 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 IGHV3OR16-8A0A075B7F1 116 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 IGHV3-74A0A0B4J1X5 117 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 SAPCD1Q5SSQ6 148 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 IGFL2Q6UWQ7 119 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 GAFA1Q96PS6 74 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 DOCK11Q5JSL3 2073 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 Q8NFD4 153 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 ZNRD1Q9P1U0 126 aa10.02□□□□□ -0.81
COLCA1-201ENST00000355430 IGHV3-66A0A0C4DH42 116 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 IGHV1-8P0DP01 117 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 ATP5L2Q7Z4Y8 100 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 DMRTC2Q8IXT2 367 aaPredicted RBP10.01□□□□□ -0.81
COLCA1-201ENST00000355430 IGKV1-16P04430 117 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 TRAV41A0A0B4J266 112 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 KRTAP27-1Q3LI81 207 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 Q6ZWC4 215 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 KLK15Q9H2R5 256 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 ABCA4P78363 2273 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 UBE2L6O14933 153 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 TMEM200BQ69YZ2 307 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 Q71RC1 249 aaPredicted RBP10.01□□□□□ -0.81
COLCA1-201ENST00000355430 ZNF502Q8TBZ5 544 aa10.01□□□□□ -0.81
COLCA1-201ENST00000355430 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
COLCA1-201ENST00000355430 SAP30O75446 220 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 RNASE2P10153 161 aaKnown RBP10□□□□□ -0.81
COLCA1-201ENST00000355430 DEFB113Q30KQ7 82 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 LYRM7Q5U5X0 104 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 Q6ZR03 302 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 CIARTQ8N365 385 aaPredicted RBP10□□□□□ -0.81
COLCA1-201ENST00000355430 HIST1H4GQ99525 98 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 PRORYQ9H606 182 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 FAM215AQ9Y5M1 114 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 TRBV20OR9-2A0A075B6H5 130 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 PSMB2P49721 201 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 MUC22E2RYF6 1773 aaPredicted RBP10□□□□□ -0.81
COLCA1-201ENST00000355430 H0YJW9 148 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 HIST1H1AQ02539 215 aaPredicted RBP10□□□□□ -0.81
COLCA1-201ENST00000355430 Q0VG73 95 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 STHQ8IWL8 128 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 LY6HO94772 140 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 TPTE2P1Q5T6R2 138 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 ZNF329Q86UD4 541 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 MAPK1IP1LQ8NDC0 245 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 DCAF16Q9NXF7 216 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 TMEM131Q92545 1883 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 A0A1B0GW15 77 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 CIDEAO60543 219 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 CD24P25063 80 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 ORMDL3Q8N138 153 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 TMEM160Q9NX00 188 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 PSG8Q9UQ74 426 aa10□□□□□ -0.81
COLCA1-201ENST00000355430 RASL11AQ6T310 242 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 EXOC3-AS1Q8N2X6 119 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 KIR3DL3Q8N743 410 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 H3BVH4 76 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 SMIM13P0DJ93 91 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 KLRD1Q13241 179 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 ZNF407Q9C0G0 2248 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 IGHV3-49A0A0A0MS15 119 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 hDV102S1A0JD36 115 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 Q6AWC8 147 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 SPOCK3Q9BQ16 436 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 SCRT1Q9BWW7 348 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 LDLRAD2Q5SZI1 272 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 FER1L6-AS1Q8NA97 138 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 C20orf144Q9BQM9 153 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 ZNF318Q5VUA4 2279 aa9.99□□□□□ -0.81
COLCA1-201ENST00000355430 RHOGP84095 191 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 AMMECR1LQ6DCA0 310 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 TMEM219Q86XT9 240 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 TMEM167AQ8TBQ9 72 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 RNF125Q96EQ8 232 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 TMEM14BQ9NUH8 114 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms