RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 LINC00473A8K010 186 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 IGKV1D-17A0A075B6S4 117 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 STAG3L3P0CL85 134 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 Q8TAT8 98 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 GSN-AS1Q9NRJ2 163 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 AKAP6Q13023 2319 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 OOSP1A8MZH6 123 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 SUPT4H1P63272 117 aaKnown RBP10.81□□□□□ -0.68
SCN8A-202ENST00000355133 ZNF876PQ49A33 203 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 PRR30Q53SZ7 412 aaPredicted RBP10.81□□□□□ -0.68
SCN8A-202ENST00000355133 BMPERQ8N8U9 685 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 A0A0G2JMZ2 1700 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 LRRC37A2A6NM11 1700 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 SPSB3Q6PJ21 355 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 ASCL4Q6XD76 172 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 LHFPL1Q86WI0 220 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 RFNGQ9Y644 331 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 THADAQ6YHU6 1953 aa10.81□□□□□ -0.68
SCN8A-202ENST00000355133 TRBV7-1A0A0A6YYK4 115 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 TDGF1P3P51864 188 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 CMC4P56277 68 aaPredicted RBP10.8□□□□□ -0.68
SCN8A-202ENST00000355133 Q6ZS92 163 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 Q6P435 159 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 TCRAP04437 139 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 LYZL1Q6UWQ5 148 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 TRGV9Q99603 122 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 FNDC4Q9H6D8 234 aaPredicted RBP10.8□□□□□ -0.68
SCN8A-202ENST00000355133 XIRP1Q702N8 1843 aaKnown RBP10.8□□□□□ -0.68
SCN8A-202ENST00000355133 FGF16O43320 207 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 LAGE3Q14657 143 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 TMEM249Q2WGJ8 235 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 IFI27L1Q96BM0 104 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 RNF5Q99942 180 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 LAMTOR2Q9Y2Q5 125 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 CACNA1GO43497 2377 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 LINC01356Q8N9X3 169 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 DERL1Q9BUN8 251 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 SPTBN2O15020 2390 aa10.8□□□□□ -0.68
SCN8A-202ENST00000355133 D6R8Y8 96 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 CKS1BP61024 79 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 MAPK1IP1LQ8NDC0 245 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 C5orf30Q96GV9 206 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 TRAV8-2A0A0B4J237 113 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 S100A7L2Q5SY68 101 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 SIGLEC9Q9Y336 463 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 HOXA3O43365 443 aaPredicted RBP10.79□□□□□ -0.68
SCN8A-202ENST00000355133 PLNP26678 52 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 ZNF138P52744 262 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 ATP5L2Q7Z4Y8 100 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 TRAV9-2A0A087WT02 112 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 RNF223E7ERA6 249 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 RUSC1-AS1Q66K80 236 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 AGMATQ9BSE5 352 aa10.79□□□□□ -0.68
SCN8A-202ENST00000355133 E7EQL1 145 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST1H2BKO60814 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST1H2BJP06899 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST1H2BOP23527 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST1H2BBP33778 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 SAA4P35542 130 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST1H2BDP58876 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST1H2BCP62807 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST2H2BEQ16778 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST1H2BHQ93079 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST1H2BNQ99877 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 HIST1H2BMQ99879 126 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 DOCK6Q96HP0 2047 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 SH2D1AO60880 128 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 IGHG3P01860 377 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 TMEM86BQ8N661 226 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 CHCHD1Q96BP2 118 aaKnown RBP10.78□□□□□ -0.68
SCN8A-202ENST00000355133 EP300Q09472 2414 aaPredicted RBP10.78□□□□□ -0.68
SCN8A-202ENST00000355133 SP5Q6BEB4 398 aaPredicted RBP10.78□□□□□ -0.68
SCN8A-202ENST00000355133 DMRTC2Q8IXT2 367 aaPredicted RBP10.78□□□□□ -0.68
SCN8A-202ENST00000355133 NMSQ5H8A3 153 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 LCN12Q6JVE5 192 aa10.78□□□□□ -0.68
SCN8A-202ENST00000355133 NTF4P34130 210 aa10.77□□□□□ -0.68
SCN8A-202ENST00000355133 RPL36AP83881 106 aaKnown RBP10.77□□□□□ -0.68
SCN8A-202ENST00000355133 C9orf139Q6ZV77 190 aa10.77□□□□□ -0.68
SCN8A-202ENST00000355133 RPL36ALQ969Q0 106 aaKnown RBP10.77□□□□□ -0.68
SCN8A-202ENST00000355133 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.69
SCN8A-202ENST00000355133 RHPN1-AS1Q9BWJ2 59 aa10.77□□□□□ -0.69
SCN8A-202ENST00000355133 SLC25A16P16260 332 aa10.77□□□□□ -0.69
SCN8A-202ENST00000355133 CST9LQ9H4G1 147 aa10.77□□□□□ -0.69
SCN8A-202ENST00000355133 A0A1B0GV72 72 aa10.77□□□□□ -0.69
SCN8A-202ENST00000355133 MSRB2Q9Y3D2 182 aa10.77□□□□□ -0.69
SCN8A-202ENST00000355133 LSM4Q9Y4Z0 139 aaKnown RBP10.77□□□□□ -0.69
SCN8A-202ENST00000355133 LTBP1Q14766 1721 aa10.77□□□□□ -0.69
SCN8A-202ENST00000355133 GHRHP01286 108 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 MLANAQ16655 118 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 RPP25LQ8N5L8 163 aaKnown RBP10.76□□□□□ -0.69
SCN8A-202ENST00000355133 USMG5Q96IX5 58 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 CYTL1Q9NRR1 136 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 ZNRD1Q9P1U0 126 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 CXCL1P09341 107 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 SYNJ2BPP57105 145 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 TMEM14EPQ6UXP3 125 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 CLDN16Q9Y5I7 305 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
SCN8A-202ENST00000355133 CD5P06127 495 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms