RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ARMS2P0C7Q2 107 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 RNASE2P10153 161 aaKnown RBP6.17□□□□□ -1.42
BRCA1-201ENST00000352993 CD300EQ496F6 205 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-201ENST00000352993 PPP1R32Q7Z5V6 425 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 OR9G4Q8NGQ1 327 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 TTTY12Q9BZ98 90 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 TPRP12270 2363 aaKnown RBP6.17□□□□□ -1.42
BRCA1-201ENST00000352993 MAP1BP46821 2468 aaKnown RBP6.17□□□□□ -1.42
BRCA1-201ENST00000352993 APOBEC3AP31941 199 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-201ENST00000352993 ETDBQ3ZM63 59 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 INO80CQ6PI98 192 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-201ENST00000352993 GOLT1AQ6ZVE7 132 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 SH2D6Q7Z4S9 175 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 SMRP1Q8NCR6 262 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 PRSS33Q8NF86 280 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 FXYD5Q96DB9 178 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 TRAV26-1A0A087WT03 109 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 SAA1P0DJI8 122 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-201ENST00000352993 CFHR2P36980 270 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 LOXL1Q08397 574 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-201ENST00000352993 WFDC2Q14508 124 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 C2orf83Q53S99 150 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 C10orf55Q5SWW7 151 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 HARBI1Q96MB7 349 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 TTTY13Q9BZ97 58 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 RP1L1Q8IWN7 2480 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-201ENST00000352993 SPAARA0A1B0GVQ0 90 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 SRRM4A7MD48 611 aaKnown RBP6.16□□□□□ -1.42
BRCA1-201ENST00000352993 FNDC10F2Z333 226 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 SLC25A17O43808 307 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 IGFBP4P22692 258 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 PEAR1Q5VY43 1037 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-201ENST00000352993 PATE2Q6UY27 113 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 PRR7Q8TB68 274 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 Q9H3A6 140 aa6.16□□□□□ -1.42
BRCA1-201ENST00000352993 NBL1P41271 181 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 LOXL3P58215 753 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 HCP5Q6MZN7 132 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 UBALD2Q8IYN6 164 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 BOD1L2Q8IYS8 172 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 OR1L8Q8NGR8 309 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 ITLN1Q8WWA0 313 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 PRRC2CQ9Y520 2896 aaKnown RBP6.15□□□□□ -1.42
BRCA1-201ENST00000352993 WISP2O76076 250 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 PRSS1P07477 247 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 SUB1P53999 127 aaKnown RBP eCLIP6.15□□□□□ -1.421e-6■■■■■ 30.7
BRCA1-201ENST00000352993 FXYD2P54710 66 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 MOGAT3Q86VF5 341 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 OR5AN1Q8NGI8 311 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 ARPC1AQ92747 370 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 FMC1Q96HJ9 113 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 ROS1P08922 2347 aa6.15□□□□□ -1.42
BRCA1-201ENST00000352993 IGKV1D-17A0A075B6S4 117 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 TCRBV4S1A1TA0A5B7 111 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 D6R8Y8 96 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-201ENST00000352993 NKX2-8O15522 239 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 TCRAP04437 139 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 FGF6P10767 208 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 TCF15Q12870 199 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 AMTNQ6UX39 209 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 STXBP6Q8NFX7 210 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 DDB2Q92466 427 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 IFI27L1Q96BM0 104 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 ZNF714Q96N38 554 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 INSIG2Q9Y5U4 225 aa6.15□□□□□ -1.43
BRCA1-201ENST00000352993 ADAMTS20P59510 1910 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 KBTBD11-OT1A0A1B0GTJ5 212 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 A0A1W2PRD5 423 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 A0A1W2PRF3 423 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 A0A1W2PRM7 423 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 H3BMG7 143 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 SPRY3O43610 288 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 CT45A6P0DMU7 189 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 CT45A5P0DMU8 189 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 CT45A7P0DMV0 189 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 CRYBA4P53673 196 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 EXOC3-AS1Q8N2X6 119 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 RPRMLQ8N4K4 120 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 CACNG8Q8WXS5 425 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 PRELID3AQ96N28 172 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 VGLL1Q99990 258 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 C7orf69Q9H7B7 122 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 C22orf46C9J442 243 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 LYZP61626 148 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 ATP5G2Q06055 141 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 FAM90A1Q86YD7 464 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 DKK2Q9UBU2 259 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 MRPS17Q9Y2R5 130 aaKnown RBP6.14□□□□□ -1.43
BRCA1-201ENST00000352993 ENSAO43768 121 aaKnown RBP6.14□□□□□ -1.43
BRCA1-201ENST00000352993 SCGB1A1P11684 91 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 CCDC144NLQ6NUI1 221 aa6.14□□□□□ -1.43
BRCA1-201ENST00000352993 GEMIN7Q9H840 131 aaKnown RBP6.14□□□□□ -1.43
BRCA1-201ENST00000352993 LY6G6EA0A0G2JKS1 128 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 A0A1B0GWB2 263 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 BDP1A6H8Y1 2624 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 HAX1O00165 279 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 IGHV1-2P23083 117 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 MEOX1P50221 254 aa6.13□□□□□ -1.43
BRCA1-201ENST00000352993 CT83Q5H943 113 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms