RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 LINC00322Q6ZN03 302 aaPredicted RBP12.03□□□□□ -0.48
TRAF3-202ENST00000351691 RPRMLQ8N4K4 120 aa12.03□□□□□ -0.48
TRAF3-202ENST00000351691 THAP8Q8NA92 274 aa12.03□□□□□ -0.48
TRAF3-202ENST00000351691 FDCSPQ8NFU4 85 aa12.03□□□□□ -0.48
TRAF3-202ENST00000351691 CT45A3Q8NHU0 189 aa12.03□□□□□ -0.48
TRAF3-202ENST00000351691 ITLN1Q8WWA0 313 aa12.03□□□□□ -0.48
TRAF3-202ENST00000351691 MCRIP2Q9BUT9 160 aaKnown RBP12.03□□□□□ -0.48
TRAF3-202ENST00000351691 CALYQ9NYX4 217 aa12.03□□□□□ -0.48
TRAF3-202ENST00000351691 TCRBV4S1A1TA0A5B7 111 aa12.02□□□□□ -0.48
TRAF3-202ENST00000351691 NKX2-8O15522 239 aa12.02□□□□□ -0.48
TRAF3-202ENST00000351691 CD24P25063 80 aa12.02□□□□□ -0.48
TRAF3-202ENST00000351691 GNG5P63218 68 aa12.02□□□□□ -0.48
TRAF3-202ENST00000351691 OR5AN1Q8NGI8 311 aa12.02□□□□□ -0.48
TRAF3-202ENST00000351691 TMEM190Q8WZ59 177 aa12.02□□□□□ -0.48
TRAF3-202ENST00000351691 TIMM23BQ5SRD1 257 aa12.02□□□□□ -0.49
TRAF3-202ENST00000351691 H0Y8G0 127 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 CFHR2P36980 270 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 MLANAQ16655 118 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 SLC25A48Q6ZT89 311 aaKnown RBP12.01□□□□□ -0.49
TRAF3-202ENST00000351691 OR4A5Q8NH83 315 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 PROCRQ9UNN8 238 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 PTPRZ1P23471 2315 aaPredicted RBP12.01□□□□□ -0.49
TRAF3-202ENST00000351691 TRBV6-1A0A0K0K1D8 114 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 PGPA6NDG6 321 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 GNG7O60262 68 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 NCR2O95944 276 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 AZU1P20160 251 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 ZNF137PP52743 207 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 ZNF138P52744 262 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 ERHP84090 104 aaKnown RBP12.01□□□□□ -0.49
TRAF3-202ENST00000351691 HOXA4Q00056 320 aaPredicted RBP12.01□□□□□ -0.49
TRAF3-202ENST00000351691 ZADH2Q8N4Q0 377 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 PERPQ96FX8 193 aa12.01□□□□□ -0.49
TRAF3-202ENST00000351691 DCHS1Q96JQ0 3298 aa12□□□□□ -0.49
TRAF3-202ENST00000351691 LOC400499M0QZD8 3231 aa12□□□□□ -0.49
TRAF3-202ENST00000351691 IGKV1D-17A0A075B6S4 117 aa12□□□□□ -0.49
TRAF3-202ENST00000351691 IGHV1-18A0A0C4DH31 117 aa12□□□□□ -0.49
TRAF3-202ENST00000351691 SNAI2O43623 268 aa12□□□□□ -0.49
TRAF3-202ENST00000351691 FABP6P51161 128 aa12□□□□□ -0.49
TRAF3-202ENST00000351691 RIGQ13278 110 aa12□□□□□ -0.49
TRAF3-202ENST00000351691 BHLHA15Q7RTS1 189 aaPredicted RBP12□□□□□ -0.49
TRAF3-202ENST00000351691 PIFOQ8TCI5 191 aa12□□□□□ -0.49
TRAF3-202ENST00000351691 ABHD17AQ96GS6 310 aa12□□□□□ -0.49
TRAF3-202ENST00000351691 ZNF71Q9NQZ8 489 aaPredicted RBP12□□□□□ -0.49
TRAF3-202ENST00000351691 PPIAL4EA0A075B759 164 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 PPIAL4CA0A0B4J2A2 164 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 SRRM5B3KS81 715 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 OVOL3O00110 214 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 CT45A10P0DMU9 189 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 PPIAL4FP0DN26 164 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 C17orf58Q2M2W7 97 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 TMEM30BQ3MIR4 351 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 ASCL5Q7RTU5 278 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 NDUFA4L2Q9NRX3 87 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 SIGLEC8Q9NYZ4 499 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 DOCK7Q96N67 2140 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 SPTBN2O15020 2390 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 C22orf46C9J442 243 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 C3orf36Q3SXR2 165 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 CD300EQ496F6 205 aaPredicted RBP11.99□□□□□ -0.49
TRAF3-202ENST00000351691 SAMD5Q5TGI4 173 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 IGF2-ASQ6U949 168 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 ATP6V0BQ99437 205 aa11.99□□□□□ -0.49
TRAF3-202ENST00000351691 IGKV1D-37A0A075B6S9 117 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 A0A1B0GUT8 65 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 SMIM13P0DJ93 91 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 FOXI2Q6ZQN5 318 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 SLC25A15Q9Y619 301 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 AKAP13Q12802 2813 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 KBTBD11-OT1A0A1B0GTJ5 212 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 J3QR89 54 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 TCRAP04437 139 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 LINC00305Q7Z4B0 112 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 PRSS3P2Q8NHM4 247 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 HIGD1BQ9P298 99 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 HILPDAQ9Y5L2 63 aa11.98□□□□□ -0.49
TRAF3-202ENST00000351691 CFAP47Q6ZTR5 3102 aa11.97□□□□□ -0.49
TRAF3-202ENST00000351691 MBD3L4A6NDZ8 208 aaPredicted RBP11.97□□□□□ -0.49
TRAF3-202ENST00000351691 MBD3L3A6NE82 208 aaPredicted RBP11.97□□□□□ -0.49
TRAF3-202ENST00000351691 MBD3L5A6NJ08 208 aaPredicted RBP11.97□□□□□ -0.49
TRAF3-202ENST00000351691 CT45A6P0DMU7 189 aa11.97□□□□□ -0.49
TRAF3-202ENST00000351691 CT45A5P0DMU8 189 aa11.97□□□□□ -0.49
TRAF3-202ENST00000351691 CT45A7P0DMV0 189 aa11.97□□□□□ -0.49
TRAF3-202ENST00000351691 ZCCHC24Q8N2G6 241 aaKnown RBP11.97□□□□□ -0.49
TRAF3-202ENST00000351691 MBD3L2Q8NHZ7 208 aaPredicted RBP11.97□□□□□ -0.49
TRAF3-202ENST00000351691 THYN1Q9P016 225 aa11.97□□□□□ -0.49
TRAF3-202ENST00000351691 INSIG2Q9Y5U4 225 aa11.97□□□□□ -0.49
TRAF3-202ENST00000351691 TEX48A0A1B0GUV7 120 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 CEACAM4O75871 244 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 IGHV3-13P01766 116 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 IGHV3-7P01780 117 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 CSN3P07498 182 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 SUB1P53999 127 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAF3-202ENST00000351691 PRR31Q5SQ13 230 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 RBMXL3Q8N7X1 1067 aaKnown RBP11.96□□□□□ -0.49
TRAF3-202ENST00000351691 OSR1Q8TAX0 266 aaPredicted RBP11.96□□□□□ -0.49
TRAF3-202ENST00000351691 BLNKQ8WV28 456 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 SPATA25Q9BR10 227 aa11.96□□□□□ -0.49
TRAF3-202ENST00000351691 A0A096LNJ9 63 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms