RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ZNF705DP0CH99 300 aaPredicted RBP17.55■□□□□ 0.4
UPF3A-201ENST00000351487 ZNF705BP0CI00 300 aaPredicted RBP17.55■□□□□ 0.4
UPF3A-201ENST00000351487 TOMM20LQ6UXN7 152 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 RCHY1Q96PM5 261 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 NEU1Q99519 415 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 ODF3BA8MYP8 253 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 K7EIM0 57 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 CEACAM3P40198 252 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 ATP5L2Q7Z4Y8 100 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 NPBQ8NG41 125 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 TMEM68Q96MH6 324 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 MRPL27Q9P0M9 148 aaKnown RBP17.55■□□□□ 0.4
UPF3A-201ENST00000351487 ZNF492Q9P255 531 aa17.55■□□□□ 0.4
UPF3A-201ENST00000351487 ABCA1O95477 2261 aa17.54■□□□□ 0.4
UPF3A-201ENST00000351487 CNIH1O95406 144 aa17.54■□□□□ 0.4
UPF3A-201ENST00000351487 ARF6P62330 175 aa17.54■□□□□ 0.4
UPF3A-201ENST00000351487 CT83Q5H943 113 aa17.54■□□□□ 0.4
UPF3A-201ENST00000351487 TMEM190Q8WZ59 177 aa17.54■□□□□ 0.4
UPF3A-201ENST00000351487 RBM14Q96PK6 669 aaKnown RBP17.54■□□□□ 0.4
UPF3A-201ENST00000351487 PRSS22Q9GZN4 317 aa17.54■□□□□ 0.4
UPF3A-201ENST00000351487 OTORQ9NRC9 128 aa17.54■□□□□ 0.4
UPF3A-201ENST00000351487 RPH3ALQ9UNE2 315 aa17.54■□□□□ 0.4
UPF3A-201ENST00000351487 RAXQ9Y2V3 346 aa17.54■□□□□ 0.4
UPF3A-201ENST00000351487 HIGD1CA8MV81 97 aa17.53■□□□□ 0.4
UPF3A-201ENST00000351487 CDKN1AP38936 164 aa17.53■□□□□ 0.4
UPF3A-201ENST00000351487 A0A1W2PS18 150 aa17.53■□□□□ 0.4
UPF3A-201ENST00000351487 NEU4Q8WWR8 484 aaPredicted RBP17.53■□□□□ 0.4
UPF3A-201ENST00000351487 SGK494Q96LW2 274 aa17.53■□□□□ 0.4
UPF3A-201ENST00000351487 ZNF586Q9NXT0 402 aa17.53■□□□□ 0.4
UPF3A-201ENST00000351487 A0A1B0GXF2 115 aa17.52■□□□□ 0.4
UPF3A-201ENST00000351487 GDF5OSQ5U4N7 250 aa17.52■□□□□ 0.4
UPF3A-201ENST00000351487 RPP21Q9H633 154 aaKnown RBP17.52■□□□□ 0.4
UPF3A-201ENST00000351487 TBL2Q9Y4P3 447 aaKnown RBP17.52■□□□□ 0.4
UPF3A-201ENST00000351487 C19orf71A6NCJ1 209 aa17.52■□□□□ 0.39
UPF3A-201ENST00000351487 PRTN3P24158 256 aa17.52■□□□□ 0.39
UPF3A-201ENST00000351487 AMTP48728 403 aa17.52■□□□□ 0.39
UPF3A-201ENST00000351487 COL25A1Q9BXS0 654 aaPredicted RBP17.52■□□□□ 0.39
UPF3A-201ENST00000351487 FBXL7Q9UJT9 491 aa17.52■□□□□ 0.39
UPF3A-201ENST00000351487 ARHGAP32A7KAX9 2087 aa17.52■□□□□ 0.39
UPF3A-201ENST00000351487 H3BTX0 84 aa17.51■□□□□ 0.39
UPF3A-201ENST00000351487 ZNF324O75467 553 aaPredicted RBP17.51■□□□□ 0.39
UPF3A-201ENST00000351487 OR2J3O76001 311 aa17.51■□□□□ 0.39
UPF3A-201ENST00000351487 LINC00322Q6ZN03 302 aaPredicted RBP17.51■□□□□ 0.39
UPF3A-201ENST00000351487 C18orf32Q8TCD1 76 aa17.51■□□□□ 0.39
UPF3A-201ENST00000351487 C20orf144Q9BQM9 153 aa17.51■□□□□ 0.39
UPF3A-201ENST00000351487 HILPDAQ9Y5L2 63 aa17.51■□□□□ 0.39
UPF3A-201ENST00000351487 LOC105371242A0A075B767 164 aa17.51■□□□□ 0.39
UPF3A-201ENST00000351487 VWC2LB2RUY7 222 aa17.51■□□□□ 0.39
UPF3A-201ENST00000351487 RNF114Q9Y508 228 aa17.51■□□□□ 0.39
UPF3A-201ENST00000351487 A0A1B0GV90 55 aa17.5■□□□□ 0.39
UPF3A-201ENST00000351487 HOXB4P17483 251 aaPredicted RBP17.5■□□□□ 0.39
UPF3A-201ENST00000351487 KLRD1Q13241 179 aa17.5■□□□□ 0.39
UPF3A-201ENST00000351487 SHANK2-AS3Q9BTD1 123 aa17.5■□□□□ 0.39
UPF3A-201ENST00000351487 NRN1Q9NPD7 142 aa17.5■□□□□ 0.39
UPF3A-201ENST00000351487 Q86TA4 180 aa17.49■□□□□ 0.39
UPF3A-201ENST00000351487 H3BRN7 92 aa17.49■□□□□ 0.39
UPF3A-201ENST00000351487 KLF5Q13887 457 aaPredicted RBP17.49■□□□□ 0.39
UPF3A-201ENST00000351487 SOX21Q9Y651 276 aaPredicted RBP17.49■□□□□ 0.39
UPF3A-201ENST00000351487 TRBV6-1A0A0K0K1D8 114 aa17.48■□□□□ 0.39
UPF3A-201ENST00000351487 A8MWL6 223 aa17.48■□□□□ 0.39
UPF3A-201ENST00000351487 C5orf64Q2M2E5 130 aa17.48■□□□□ 0.39
UPF3A-201ENST00000351487 Q8N976 141 aa17.48■□□□□ 0.39
UPF3A-201ENST00000351487 VN1R17PQ8TDU5 208 aa17.48■□□□□ 0.39
UPF3A-201ENST00000351487 FAM103A1Q9BTL3 118 aaKnown RBP17.48■□□□□ 0.39
UPF3A-201ENST00000351487 GFRA4Q9GZZ7 299 aa17.48■□□□□ 0.39
UPF3A-201ENST00000351487 P01737 135 aa17.48■□□□□ 0.39
UPF3A-201ENST00000351487 GPR6P46095 362 aaPredicted RBP17.48■□□□□ 0.39
UPF3A-201ENST00000351487 RNF24Q9Y225 148 aa17.48■□□□□ 0.39
UPF3A-201ENST00000351487 IGF2RP11717 2491 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 NPIPB6E9PJ23 425 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 IGLV2-11P01706 119 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 PMCHP20382 165 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 C1orf122Q6ZSJ8 110 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 DTX2Q86UW9 622 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 ZZEF1O43149 2961 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 TDRG1Q3Y452 100 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 BPIFA4PQ86YQ2 179 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 ZNF491Q8N8L2 437 aa17.47■□□□□ 0.39
UPF3A-201ENST00000351487 TRBV19A0A075B6N1 114 aa17.46■□□□□ 0.39
UPF3A-201ENST00000351487 EREGO14944 169 aa17.46■□□□□ 0.39
UPF3A-201ENST00000351487 IGLC2P0DOY2 106 aa17.46■□□□□ 0.39
UPF3A-201ENST00000351487 HBBP68871 147 aa17.46■□□□□ 0.39
UPF3A-201ENST00000351487 TCF24Q7RTU0 167 aa17.46■□□□□ 0.39
UPF3A-201ENST00000351487 NIT1Q86X76 327 aa17.46■□□□□ 0.39
UPF3A-201ENST00000351487 ALKBH7Q9BT30 221 aaPredicted RBP17.46■□□□□ 0.39
UPF3A-201ENST00000351487 VAMP8Q9BV40 100 aa17.46■□□□□ 0.39
UPF3A-201ENST00000351487 FAM231BA6NCW3 169 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 NPIPB5A8MRT5 1133 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 KRTDAPP60985 99 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 FBLN7Q53RD9 439 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 EXOC3-AS1Q8N2X6 119 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 KIR3DL3Q8N743 410 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 GTSF1Q8WW33 167 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 RNF125Q96EQ8 232 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 ZNF48Q96MX3 618 aaPredicted RBP17.45■□□□□ 0.38
UPF3A-201ENST00000351487 A6NNC1 897 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 CCDC144NLQ6NUI1 221 aa17.45■□□□□ 0.38
UPF3A-201ENST00000351487 IGLV11-55A0A075B6I3 123 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 WI2-2373I1.2A0A1W2PRP0 233 aa17.44■□□□□ 0.38
UPF3A-201ENST00000351487 OOSP1A8MZH6 123 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms