RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SP5Q6BEB4 398 aaPredicted RBP9.89□□□□□ -0.83
SMAD9-201ENST00000350148 C8orf46Q8TAG6 207 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 C1orf43Q9BWL3 253 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 A0A0G2JRQ6 117 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 PEX7O00628 323 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 CDKN1BP46527 198 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 SEC11AP67812 179 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 SPSB3Q6PJ21 355 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 BPESC1Q9GZL8 116 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 HEATR1Q9H583 2144 aaKnown RBP9.89□□□□□ -0.83
SMAD9-201ENST00000350148 SDF2L1Q9HCN8 221 aa9.89□□□□□ -0.83
SMAD9-201ENST00000350148 BEX4Q9NWD9 120 aaPredicted RBP9.89□□□□□ -0.83
SMAD9-201ENST00000350148 KIAA1644Q3SXP7 199 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 TM4SF20Q53R12 229 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 MIR17HGQ75NE6 70 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 EAF1Q96JC9 268 aaPredicted RBP9.88□□□□□ -0.83
SMAD9-201ENST00000350148 YAE1D1Q9NRH1 226 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 SS18L2Q9UHA2 77 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 ZNF841Q6ZN19 808 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 RNF125Q96EQ8 232 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 TRAV40A0A0B4J280 105 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 TWIST1Q15672 202 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 Q6ZRM9 215 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 RBPMS2Q6ZRY4 209 aaKnown RBP9.88□□□□□ -0.83
SMAD9-201ENST00000350148 IL15RAQ13261 267 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 OR4X2Q8NGF9 303 aa9.88□□□□□ -0.83
SMAD9-201ENST00000350148 RNASE2P10153 161 aaKnown RBP9.87□□□□□ -0.83
SMAD9-201ENST00000350148 SSBP2P81877 361 aaPredicted RBP9.87□□□□□ -0.83
SMAD9-201ENST00000350148 HIST1H1AQ02539 215 aaPredicted RBP9.87□□□□□ -0.83
SMAD9-201ENST00000350148 C5orf24Q7Z6I8 188 aa9.87□□□□□ -0.83
SMAD9-201ENST00000350148 ATG2AQ2TAZ0 1938 aa9.87□□□□□ -0.83
SMAD9-201ENST00000350148 CENPWQ5EE01 88 aa9.87□□□□□ -0.83
SMAD9-201ENST00000350148 UFC1Q9Y3C8 167 aa9.87□□□□□ -0.83
SMAD9-201ENST00000350148 TRAV41A0A0B4J266 112 aa9.87□□□□□ -0.83
SMAD9-201ENST00000350148 MYOD1P15172 320 aa9.87□□□□□ -0.83
SMAD9-201ENST00000350148 ADORA2A-AS1P86434 159 aa9.87□□□□□ -0.83
SMAD9-201ENST00000350148 C9orf153Q5TBE3 101 aa9.87□□□□□ -0.83
SMAD9-201ENST00000350148 CENPFP49454 3210 aa9.87□□□□□ -0.83
SMAD9-201ENST00000350148 TRAV9-2A0A087WT02 112 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 SAMD5Q5TGI4 173 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 Q6AWC8 147 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 TRAV3A0A0B4J244 114 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 FSTL3O95633 263 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 SNRPD3P62318 126 aaKnown RBP9.86□□□□□ -0.83
SMAD9-201ENST00000350148 SLAQ13239 276 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 EDA2RQ9HAV5 297 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 ST20Q9HBF5 79 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 MSMBP08118 114 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 RHOGP84095 191 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 USMG5Q96IX5 58 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 KCNS1Q96KK3 526 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 TRBV7-1A0A0A6YYK4 115 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 TRAV5A0A0B4J249 113 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 CR1LQ2VPA4 569 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 ZNF562Q6V9R5 426 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 SMIM20Q8N5G0 67 aa9.86□□□□□ -0.83
SMAD9-201ENST00000350148 FAM223BA6NKX1 122 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 CBLN1P23435 193 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 FAM223AQ8IWN6 122 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 MGST2Q99735 147 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 NDUFA4L2Q9NRX3 87 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 A8MWP6 167 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 AMBPP02760 352 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 VDAC2P45880 294 aaPredicted RBP9.85□□□□□ -0.83
SMAD9-201ENST00000350148 ZNF664Q8N3J9 261 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 TMEM170AQ8WVE7 144 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 GVINP1Q7Z2Y8 2422 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 TMSB15BA0A087X1C1 80 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 IGKV1-39P01597 117 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 IGKV1D-39P04432 117 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 KLRD1Q13241 179 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 TMEM242Q9NWH2 141 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 LY96Q9Y6Y9 160 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 A8MWV9 139 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 IMMP2LQ96T52 175 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 NRN1Q9NPD7 142 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 IL36BQ9NZH7 164 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 TTC28Q96AY4 2481 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 GOLT1AQ6ZVE7 132 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 PEMTQ9UBM1 199 aa9.85□□□□□ -0.83
SMAD9-201ENST00000350148 J3KRW8 73 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 CLEC19AQ6UXS0 136 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 SYT8Q8NBV8 401 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 IGHV3-48P01763 117 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 C1QL4Q86Z23 238 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 CIARTQ8N365 385 aaPredicted RBP9.84□□□□□ -0.83
SMAD9-201ENST00000350148 Q9H3A6 140 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 TMEM50AO95807 157 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 DTX2Q86UW9 622 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 AGMATQ9BSE5 352 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 SNHG12Q9BXW3 62 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 NHP2Q9NX24 153 aaKnown RBP9.84□□□□□ -0.83
SMAD9-201ENST00000350148 F5H697 171 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 PAX9P55771 341 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 MAP1LC3AQ9H492 121 aa9.84□□□□□ -0.83
SMAD9-201ENST00000350148 CEP250Q9BV73 2442 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 IGHV1-69DA0A0B4J2H0 117 aa9.83□□□□□ -0.84
SMAD9-201ENST00000350148 PGPEP1LA6NFU8 196 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms